CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.007G113200
(
Gossypium raimondii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
Gorai.007G113200
T050012_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.007G113200.1
bHLH
226
277
QRMTHIAVERNRRRQMNDYLNSLRSLMPPCYIQRGDQASIIAGAIDFVKELE
Gorai.007G113200.2
bHLH
148
199
QRMTHIAVERNRRRQMNDYLNSLRSLMPPCYIQRGDQASIIAGAIDFVKELE
Gorai.007G113200.3
bHLH
226
277
QRMTHIAVERNRRRQMNDYLNSLRSLMPPCYIQRGDQASIIAGAIDFVKELE
Links
Other
bHLH
family TFs
Other
Gossypium raimondii
TFs
330 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh2_kg.3__781__AT3G07565.3
Arabidopsis lyrata
fgenesh2_kg.3__781__AT3G07565.3
N
AT3G07565
Arabidopsis thaliana
AT3G07565
N
Bostr.22252s0273
Boechera stricta
Bostr.22252s0273
N
Bo1g147290
Brassica oleracea
Bo1g147290
N
Bo3g061340
Brassica oleracea
Bo3g061340
N
Bra001258
Brassica rapa
Bra001258
N
Bra029658
Brassica rapa
Bra029658
N
Bra040015
Brassica rapa
Bra040015
N
Cagra.0133s0101
Capsella grandiflora
Cagra.0133s0101
N
Carubv10014434m.g
Capsella rubella
Carubv10014434m.g
N
Thhalv10021333m.g
Eutrema salsugineum
Thhalv10021333m.g
N
Gorai.N001000
Gossypium raimondii
Gorai.N001000
N
MDP0000184998
Malus domestica
MDP0000184998
N
MDP0000716430
Malus domestica
MDP0000716430
N
cassava24109.valid.m1
Manihot esculenta
cassava24109.valid.m1
N
POPTR_0014s17210
Populus trichocarpa
POPTR_0014s17210
N
Pm007242
Prunus mume
Pm007242
N
PRUPE_ppa010592mg
Prunus persica
PRUPE_ppa010592mg
N
30005.m001261
Ricinus communis
30005.m001261
N
Solyc09g020000.2
Solanum lycopersicum
Solyc09g020000.2
N
TCM_002550
Theobroma cacao
TCM_002550
N