Pavir.Ca02967 (Panicum virgatum)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00010 (HLH) IPR001092 Pavir.Ca02967 T050718_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ca02967.1.p bHLH 194 225

Links

Other bHLH family TFs
Other Panicum virgatum TFs

7 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_002_00505 Aquilegia coerulea Aquca_002_00505 I
Bra033055 Brassica rapa Bra033055 N
CHLREDRAFT_142283 Chlamydomonas reinhardtii CHLREDRAFT_142283 N
estExt_Genewise1.C_130158 Chlorella vulgaris estExt_Genewise1.C_130158 I
estExt_fgenesh1_pm.C_130068 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pm.C_130068 I
HYDPIDRAFT_138070 Hydnomerulius pinastri HYDPIDRAFT_138070 I
MDP0000165147 Malus domestica MDP0000165147 N
cassava42041.valid.m1 Manihot esculenta cassava42041.valid.m1 I
OSTLU_19125 Ostreococcus lucimarinus OSTLU_19125 N
PAXRUDRAFT_828263 Paxillus rubicundulus PAXRUDRAFT_828263 I
PDK_20s1437671g003 Phoenix dactylifera PDK_20s1437671g003 I
29822.m003476 Ricinus communis 29822.m003476 I
SJAG_03603 Schizosaccharomyces japonicus SJAG_03603 I
Solyc02g087710.2 Solanum lycopersicum Solyc02g087710.2 I
PGSC0003DMG400018099 Solanum tuberosum PGSC0003DMG400018099 I
PGSC0003DMG400001414 Solanum tuberosum PGSC0003DMG400001414 I
CY34DRAFT_810312 Suillus luteus CY34DRAFT_810312 I
K437DRAFT_218621 Tilletiaria anomala K437DRAFT_218621 N
M407DRAFT_81488 Tulasnella calospora M407DRAFT_81488 I
estExt_Genewise1.C_10428 Volvox carteri estExt_Genewise1.C_10428 N
estExt_Genewise1.C_510099 Volvox carteri estExt_Genewise1.C_510099 N