CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ACOM029750
(
Anopheles coluzzii
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00010 (HLH)
IPR001092
ACOM029750
T052534_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAND2
M04150_2.00
Homo sapiens
MACACCTGBD
HVCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_HT-SELEX
0.839
0.788
HAND2
M04151_2.00
Homo sapiens
MACACCTGYD
HRCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_Methyl-HT-SELEX
0.839
0.788
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ACOM029750-PA
bHLH
247
299
RRNTANKKERRRTQSINSAYTSLRDRIPNVPNDTKLSKIKTLRLAISYIAHLL
Links
Other
bHLH
family TFs
Other
Anopheles coluzzii
TFs
80 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_020_00179
Aquilegia coerulea
Aquca_020_00179
N
Ciclev10025757m.g
Citrus clementina
Ciclev10025757m.g
N
orange1.1g048259m.g
Citrus sinensis
orange1.1g048259m.g
N
gene05956-v1.0-hybrid
Fragaria vesca
gene05956-v1.0-hybrid
N
Gorai.006G098600
Gossypium raimondii
Gorai.006G098600
N
Gorai.009G133300
Gossypium raimondii
Gorai.009G133300
N
Gorai.010G228000
Gossypium raimondii
Gorai.010G228000
N
cassava1476.valid.m1
Manihot esculenta
cassava1476.valid.m1
N
29872.m000548
Ricinus communis
29872.m000548
N
PGSC0003DMG400031382
Solanum tuberosum
PGSC0003DMG400031382
N
TCM_028688
Theobroma cacao
TCM_028688
N
VIT_09s0002g04700
Vitis vinifera
VIT_09s0002g04700
N