TEF (Cavia porcellus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSCPOG00000020591 T059287_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.891 1.000
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.891 1.000
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.891 1.000
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.891 1.000
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.891 1.000
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.891 1.000
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.891 1.000
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.891 1.000
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.891 1.000
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.847 0.781
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.847 0.781
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.847 0.781
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.847 0.781
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.847 0.781
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.847 0.781
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.847 0.781
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.847 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000017363 bZIP 221 284

Links

Other bZIP family TFs
Other Cavia porcellus TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI1G77150 Brachypodium distachyon BRADI1G77150 N
BRADI3G16500 Brachypodium distachyon BRADI3G16500 N
Cla006845 Citrullus lanatus Cla006845 I
Cucsa.193290 Cucumis sativus Cucsa.193290 I
MLOC_74058 Hordeum vulgare MLOC_74058 N
MLOC_66387 Hordeum vulgare MLOC_66387 I
LPERR10G12990 Leersia perrieri LPERR10G12990 N
LPERR08G03490 Leersia perrieri LPERR08G03490 N
LPERR03G01560 Leersia perrieri LPERR03G01560 N
LPERR02G22870 Leersia perrieri LPERR02G22870 I
GSMUA_Achr4G26430_001 Musa acuminata GSMUA_Achr4G26430_001 I
OBART10G17010 Oryza barthii OBART10G17010 N
OBART02G28100 Oryza barthii OBART02G28100 N
OBART03G01650 Oryza barthii OBART03G01650 N
OB02G35380 Oryza brachyantha OB02G35380 I
OB03G11610 Oryza brachyantha OB03G11610 N
OB10G24100 Oryza brachyantha OB10G24100 N
ORGLA02G0241100 Oryza glaberrima ORGLA02G0241100 N
ORGLA03G0014300 Oryza glaberrima ORGLA03G0014300 N
ORGLA08G0028800 Oryza glaberrima ORGLA08G0028800 N
ORGLA10G0119700 Oryza glaberrima ORGLA10G0119700 N
OGLUM02G28660 Oryza glumaepatula OGLUM02G28660 N
OGLUM03G01630 Oryza glumaepatula OGLUM03G01630 N
OGLUM10G17040 Oryza glumaepatula OGLUM10G17040 N
BGIOSGA005835 Oryza indica BGIOSGA005835 N
BGIOSGA031489 Oryza indica BGIOSGA031489 N
BGIOSGA028020 Oryza indica BGIOSGA028020 N
BGIOSGA011738 Oryza indica BGIOSGA011738 N
OMERI02G27240 Oryza meridionalis OMERI02G27240 N
OMERI03G01600 Oryza meridionalis OMERI03G01600 N
OMERI08G03480 Oryza meridionalis OMERI08G03480 N
OMERI10G13480 Oryza meridionalis OMERI10G13480 N
ONIVA02G30750 Oryza nivara ONIVA02G30750 N
ONIVA08G03420 Oryza nivara ONIVA08G03420 N
ONIVA10G18740 Oryza nivara ONIVA10G18740 N
ONIVA12G15340 Oryza nivara ONIVA12G15340 N
OPUNC08G03290 Oryza punctata OPUNC08G03290 N
OPUNC10G16940 Oryza punctata OPUNC10G16940 N
OPUNC02G25780 Oryza punctata OPUNC02G25780 N
OPUNC03G01540 Oryza punctata OPUNC03G01540 N
ORUFI10G18030 Oryza rufipogon ORUFI10G18030 N
ORUFI08G03850 Oryza rufipogon ORUFI08G03850 N
ORUFI02G29620 Oryza rufipogon ORUFI02G29620 N
OS02G0683500 Oryza sativa OS02G0683500 N
OS03G0120900 Oryza sativa OS03G0120900 N
OS08G0157700 Oryza sativa OS08G0157700 N
OS10G0537100 Oryza sativa OS10G0537100 N
Pavir.Ia04549 Panicum virgatum Pavir.Ia04549 N
Pavir.Ga00960 Panicum virgatum Pavir.Ga00960 N
Pavir.Fb00403 Panicum virgatum Pavir.Fb00403 N
Pavir.Ib00059 Panicum virgatum Pavir.Ib00059 N
Pavir.J06582 Panicum virgatum Pavir.J06582 N
Pavir.Ab02711 Panicum virgatum Pavir.Ab02711 I
Pavir.Aa00929 Panicum virgatum Pavir.Aa00929 N
Pavir.J38226 Panicum virgatum Pavir.J38226 N
Si011823m.g Setaria italica Si011823m.g N
Si036864m.g Setaria italica Si036864m.g N
Si020241m.g Setaria italica Si020241m.g N
Si014362m.g Setaria italica Si014362m.g N
Sb07g003880 Sorghum bicolor Sb07g003880 N
Sb06g026370 Sorghum bicolor Sb06g026370 N
Sb04g031710 Sorghum bicolor Sb04g031710 N
Sb01g049150 Sorghum bicolor Sb01g049150 N
Traes_4AL_445A910EB Triticum aestivum Traes_4AL_445A910EB N
Traes_4BL_D9784B20C1 Triticum aestivum Traes_4BL_D9784B20C1 N
Traes_4DL_A83084AC1 Triticum aestivum Traes_4DL_A83084AC1 N
Traes_6AL_44AA5642C Triticum aestivum Traes_6AL_44AA5642C I
Traes_6DL_359607E93 Triticum aestivum Traes_6DL_359607E93 I
GRMZM2G180168 Zea mays GRMZM2G180168 N
GRMZM2G142999 Zea mays GRMZM2G142999 N
GRMZM2G125095 Zea mays GRMZM2G125095 N
GRMZM2G102059 Zea mays GRMZM2G102059 N
GRMZM2G098443 Zea mays GRMZM2G098443 N
GRMZM2G082227 Zea mays GRMZM2G082227 N
GRMZM2G018485 Zea mays GRMZM2G018485 N
GRMZM2G024948 Zea mays GRMZM2G024948 N