CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSCSAG00000005557
(
Chlorocebus sabaeus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSCSAG00000005557
T059315_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HLF
M02831_2.00
Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN
SELEX
Jolma et al.(2013)
HLF_1
0.896
1.000
Hlf
M02860_2.00
Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM
SELEX
Jolma et al.(2013)
Hlf_1
0.896
1.000
HLF
M04245_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX
0.896
1.000
HLF
M04016_2.00
Homo sapiens
RTKAYRTAAB
VTTAYRTMAY
SELEX
Rodriguez-Martinez et al.(2017)
HLF.1
0.896
1.000
HLF
M08786_2.00
Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN
Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C
0.896
1.000
Hlf
M08815_2.00
Mus musculus
VTTRTGYAABH
DVTTRCAYAAB
Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C
0.896
1.000
HLF
M09937_2.00
Homo sapiens
ATKRYGTAAY
RTTACRYMAT
Transfac
Matys et al.(2006)
V$HLF_01
0.896
1.000
HLF
M04246_2.00
Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN
SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX
0.896
1.000
Tef
M01803_2.00
Mus musculus
NVTTRYVNNN
NNNBRYAABN
PBM
Weirauch et al.(2014)
pTH5078
0.847
0.794
TEF
M02849_2.00
Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN
SELEX
Jolma et al.(2013)
TEF_1
0.847
0.794
TEF
M02850_2.00
Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN
SELEX
Jolma et al.(2013)
TEF_2
0.847
0.794
TEF
M04325_2.00
Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX
0.847
0.794
TEF
M09983_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_05
0.847
0.794
TEF
M09984_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_06
0.847
0.794
TEF
M09985_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TEF_Q6
0.847
0.794
TEF
M09986_2.00
Homo sapiens
MTKAYGTAAY
RTTACRTMAK
Transfac
Matys et al.(2006)
V$VBP_01
0.847
0.794
TEF
M04326_2.00
Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN
SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX
0.847
0.794
Pdp1
M03645_2.00
Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB
SELEX
Nitta et al.(2015)
Pdp1_1
0.795
0.683
Pdp1
M03646_2.00
Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY
SELEX
Nitta et al.(2015)
Pdp1_2
0.795
0.683
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCSAP00000001865
bZIP
224
286
KDDKYWARRRKNNMAAKRSRDARRLKENQIAIRASFLEKENSALRQEVADLRKELGKCKNILA
Links
Other
bZIP
family TFs
Other
Chlorocebus sabaeus
TFs
232 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SPL11
Arabidopsis lyrata
scaffold_103051.1
I
SPL10
Arabidopsis lyrata
fgenesh2_kg.1__2893__AT1G27370.2
I
SPL10
Arabidopsis thaliana
AT1G27370
D
SPL11
Arabidopsis thaliana
AT1G27360
D
Bostr.15697s0063
Boechera stricta
Bostr.15697s0063
I
Bostr.15697s0062
Boechera stricta
Bostr.15697s0062
I
Bo5g051980
Brassica oleracea
Bo5g051980
I
Bo5g051970
Brassica oleracea
Bo5g051970
I
Bo3g141480
Brassica oleracea
Bo3g141480
I
Bo7g049950
Brassica oleracea
Bo7g049950
I
Bo7g049940
Brassica oleracea
Bo7g049940
I
Bra030041
Brassica rapa
Bra030041
I
Bra032822
Brassica rapa
Bra032822
I
Bra032823
Brassica rapa
Bra032823
I
Bra030040
Brassica rapa
Bra030040
I
Bra010949
Brassica rapa
Bra010949
I
Cagra.8874s0007
Capsella grandiflora
Cagra.8874s0007
I
Cagra.8874s0008
Capsella grandiflora
Cagra.8874s0008
I
Carubv10009364m.g
Capsella rubella
Carubv10009364m.g
I
Carubv10009367m.g
Capsella rubella
Carubv10009367m.g
I
Ca_08506
Cicer arietinum
Ca_08506
I
Eucgr.B03500
Eucalyptus grandis
Eucgr.B03500
I
Thhalv10007832m.g
Eutrema salsugineum
Thhalv10007832m.g
I
Thhalv10007882m.g
Eutrema salsugineum
Thhalv10007882m.g
I
Lus10006411.g
Linum usitatissimum
Lus10006411.g
I
Lus10011356.g
Linum usitatissimum
Lus10011356.g
I