CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSGALG00000006089
(
Gallus gallus
)
bZIP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00170 (bZIP_1)
IPR011616
ENSGALG00000006089
T059838_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ATF1
M08792_2.00
Homo sapiens
HBRCGTCAYHN
NDRTGACGYVD
Misc
Kulakovskiy et al.(2013)
ATF1_HUMAN.H11MO.0.B
0.906
0.967
ATF1
M09485_2.00
Homo sapiens
NVTGACGTMA
TKACGTCABN
Misc
Heinz et al.(2010)
K562-ATF1_GSE31477
0.906
0.967
ATF1
M09956_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q3
0.906
0.967
ATF1
M09957_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6_01
0.906
0.967
ATF1
M09958_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$ATF1_Q6
0.906
0.967
Atf1
M00124_2.00
Mus musculus
NNNNDNDNNN
NNNHNHNNNN
PBM
Badis et al.(2009)
Atf1_3026
0.896
0.967
Atf1
M01804_2.00
Mus musculus
RTGACGTV
BACGTCAY
PBM
Weirauch et al.(2014)
pTH5005
0.896
0.967
Atf1
M08820_2.00
Mus musculus
VTGACGTSAV
BTSACGTCAB
Misc
Kulakovskiy et al.(2013)
ATF1_MOUSE.H11MO.0.B
0.896
0.967
Creb1
M00992_2.00
Mus musculus
NNTGACGTCV
BGACGTCANN
PBM
Mann et al.(2013)
CREB1_UM_HK
0.894
0.900
Creb1
M01806_2.00
Mus musculus
VTKACGHNN
NNDCGTMAB
PBM
Weirauch et al.(2014)
pTH5080
0.894
0.900
CREB1
M04264_2.00
Homo sapiens
NVTKACGTMABN
NVTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_FL_HT-SELEX
0.894
0.900
CREB1
M04258_2.00
Homo sapiens
NVTKACGTMANN
NNTKACGTMABN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_1
0.894
0.900
CREB1
M04259_2.00
Homo sapiens
NRTGACGTR
YACGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_2
0.894
0.900
CREB1
M04260_2.00
Homo sapiens
VTSACRYGWBAY
RTVWCRYGTSAB
SELEX
Yin et al.(2017)
CREB1_eDBD_HT-SELEX_3
0.894
0.900
CREB1
M04022_2.00
Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.1
0.894
0.900
CREB1
M04023_2.00
Homo sapiens
RTGACGTADB
VHTACGTCAY
SELEX
Rodriguez-Martinez et al.(2017)
CREB1.2
0.894
0.900
CREB1
M08066_2.00
Homo sapiens
NVTGACGTCABN
NVTGACGTCABN
ChIP-seq
Mathelier et al.(2014)
MA0018.3
0.894
0.900
CREB1
M08791_2.00
Homo sapiens
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_HUMAN.H11MO.0.A
0.894
0.900
Creb1
M08824_2.00
Mus musculus
WKRCGTCAYYN
NRRTGACGYMW
Misc
Kulakovskiy et al.(2013)
CREB1_MOUSE.H11MO.0.A
0.894
0.900
CREB1
M09948_2.00
Homo sapiens
TGACGTMW
WKACGTCA
Transfac
Matys et al.(2006)
V$CREB_01
0.894
0.900
CREB1
M09949_2.00
Homo sapiens
BBGDTGACGYVV
BBRCGTCAHCVV
Transfac
Matys et al.(2006)
V$CREB_02
0.894
0.900
CREB1
M09950_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q3
0.894
0.900
CREB1
M09951_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREB1_Q6
0.894
0.900
CREB1
M09952_2.00
Homo sapiens
BSTGACGYARNN
NNYTRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q2
0.894
0.900
CREB1
M09953_2.00
Homo sapiens
BSTGACGYMRBV
BVYKRCGTCASV
Transfac
Matys et al.(2006)
V$CREB_Q4
0.894
0.900
CREB1
M09954_2.00
Homo sapiens
KKGGGKTGACGYMND
HNKRCGTCAMCCCMM
Transfac
Matys et al.(2006)
V$TAXCREB_01
0.894
0.900
CREB1
M09955_2.00
Homo sapiens
RTGACGCATAYCCCC
GGGGRTATGCGTCAY
Transfac
Matys et al.(2006)
V$TAXCREB_02
0.894
0.900
Creb1
M00991_2.00
Mus musculus
NNRTGACGYVN
NBRCGTCAYNN
PBM
Mann et al.(2013)
CREB1_M_HK
0.894
0.900
CREB1
M04265_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_FL_Methyl-HT-SELEX
0.894
0.900
CREB1
M04261_2.00
Homo sapiens
BRTGAYGYGND
HNCRCRTCAYV
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_1
0.894
0.900
CREB1
M04262_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_2
0.894
0.900
CREB1
M04263_2.00
Homo sapiens
NRTGACGYV
BRCGTCAYN
SELEX
Yin et al.(2017)
CREB1_eDBD_Methyl-HT-SELEX_3
0.894
0.900
Crem
M01821_2.00
Mus musculus
NRTKACGTMN
NKACGTMAYN
PBM
Weirauch et al.(2014)
pTH5002
0.880
0.883
Crem
M08845_2.00
Mus musculus
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_MOUSE.H11MO.0.C
0.880
0.883
CREM
M04229_2.00
Homo sapiens
VVTBACGTVABN
NVTBACGTVABB
SELEX
Yin et al.(2017)
CREM_eDBD_HT-SELEX
0.849
0.733
CREM
M08784_2.00
Homo sapiens
SVVTGACGTSA
TSACGTCABBS
Misc
Kulakovskiy et al.(2013)
CREM_HUMAN.H11MO.0.C
0.849
0.733
CREM
M09930_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6_01
0.849
0.733
CREM
M09931_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$CREM_Q6
0.849
0.733
CREM
M04230_2.00
Homo sapiens
NRTGACRTCAYN
NRTGAYGTCAYN
SELEX
Yin et al.(2017)
CREM_eDBD_Methyl-HT-SELEX
0.849
0.733
CrebB-17A
M03659_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_1
0.817
0.817
CrebB-17A
M03660_2.00
Drosophila melanogaster
RTGACGTCAY
RTGACGTCAY
SELEX
Nitta et al.(2015)
CrebB-17A_2
0.817
0.817
For this family, TFs with SR scores >
0.782
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSGALP00000028981
bZIP
257
316
DPQLKREIRLMKNREAARECRRKKKEYVKCLENRVAVLENQNKTLIEELKTLKDLYCHKS
Links
Other
bZIP
family TFs
Other
Gallus gallus
TFs
360 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_00859
Aegilops tauschii
F775_00859
I
F775_42893
Aegilops tauschii
F775_42893
I
AMTR_s00011p00253850
Amborella trichopoda
AMTR_s00011p00253850
I
Aquca_007_00224
Aquilegia coerulea
Aquca_007_00224
I
Aquca_010_00506
Aquilegia coerulea
Aquca_010_00506
I
GATA20
Arabidopsis lyrata
Al_scaffold_0003_3815
I
MNP
Arabidopsis lyrata
Al_scaffold_0005_1952
I
GATA19
Arabidopsis lyrata
fgenesh2_kg.7__409__AT4G36620.1
I
GATA20
Arabidopsis thaliana
AT2G18380
D
GATA18
Arabidopsis thaliana
AT3G50870
I
GATA19
Arabidopsis thaliana
AT4G36620
D
Bostr.18351s0307
Boechera stricta
Bostr.18351s0307
I
Bostr.6864s0159
Boechera stricta
Bostr.6864s0159
I
Bostr.7867s1518
Boechera stricta
Bostr.7867s1518
I
BRADI2G14890
Brachypodium distachyon
BRADI2G14890
I
BRADI2G45750
Brachypodium distachyon
BRADI2G45750
I
Bo1g005530
Brassica oleracea
Bo1g005530
I
Bo3g019610
Brassica oleracea
Bo3g019610
I
Bo7g010220
Brassica oleracea
Bo7g010220
I
Bo7g064860
Brassica oleracea
Bo7g064860
I
Bo7g100580
Brassica oleracea
Bo7g100580
I
Bo7g118030
Brassica oleracea
Bo7g118030
I
Bo8g080330
Brassica oleracea
Bo8g080330
I
Bo9g026020
Brassica oleracea
Bo9g026020
I
Bra006851
Brassica rapa
Bra006851
I
Bra010563
Brassica rapa
Bra010563
I
Bra011695
Brassica rapa
Bra011695
I
Bra012080
Brassica rapa
Bra012080
I
Bra012883
Brassica rapa
Bra012883
I
Bra017766
Brassica rapa
Bra017766
I
Bra036854
Brassica rapa
Bra036854
I
Bra037221
Brassica rapa
Bra037221
I
Bra039614
Brassica rapa
Bra039614
I
PK24471.1
Cannabis sativa
PK24471.1
I
Cagra.0926s0051
Capsella grandiflora
Cagra.0926s0051
I
Carubv10007612m.g
Capsella rubella
Carubv10007612m.g
I
Carubv10014541m.g
Capsella rubella
Carubv10014541m.g
I
Carubv10017765m.g
Capsella rubella
Carubv10017765m.g
I
evm.TU.supercontig_6.118
Carica papaya
evm.TU.supercontig_6.118
I
Ca_02038
Cicer arietinum
Ca_02038
I
Ca_16057
Cicer arietinum
Ca_16057
I
Cla014435
Citrullus lanatus
Cla014435
I
Cla014810
Citrullus lanatus
Cla014810
I
Ciclev10026328m.g
Citrus clementina
Ciclev10026328m.g
I
Cucsa.106490
Cucumis sativus
Cucsa.106490
I
Cucsa.127470
Cucumis sativus
Cucsa.127470
I
Thhalv10010986m.g
Eutrema salsugineum
Thhalv10010986m.g
I
Thhalv10022854m.g
Eutrema salsugineum
Thhalv10022854m.g
I
Thhalv10027520m.g
Eutrema salsugineum
Thhalv10027520m.g
I
gene14763-v1.0-hybrid
Fragaria vesca
gene14763-v1.0-hybrid
I
GLYMA02G06320
Glycine max
GLYMA02G06320
I
GLYMA11G07350
Glycine max
GLYMA11G07350
I
GLYMA11G25375
Glycine max
GLYMA11G25375
I
GLYMA16G25370
Glycine max
GLYMA16G25370
I
Gorai.003G014300
Gossypium raimondii
Gorai.003G014300
I
Gorai.007G202900
Gossypium raimondii
Gorai.007G202900
I
Gorai.008G067800
Gossypium raimondii
Gorai.008G067800
I
MLOC_5372
Hordeum vulgare
MLOC_5372
I
MLOC_62522
Hordeum vulgare
MLOC_62522
I
LPERR01G21790
Leersia perrieri
LPERR01G21790
I
LPERR05G21780
Leersia perrieri
LPERR05G21780
I
LPERR05G22620
Leersia perrieri
LPERR05G22620
I
Lus10028301.g
Linum usitatissimum
Lus10028301.g
I
chr2.CM0249.1330.nc
Lotus japonicus
chr2.CM0249.1330.nc
I
chr4.CM0283.270.nd
Lotus japonicus
chr4.CM0283.270.nd
I
MDP0000253174
Malus domestica
MDP0000253174
I
MDP0000310271
Malus domestica
MDP0000310271
I
cassava21185.m1
Manihot esculenta
cassava21185.m1
I
cassava5664.m1
Manihot esculenta
cassava5664.m1
I
MTR_5g020230
Medicago truncatula
MTR_5g020230
I
MTR_8g077510
Medicago truncatula
MTR_8g077510
I
mgf023982m
Mimulus guttatus
mgf023982m
I
GSMUA_Achr11G17770_001
Musa acuminata
GSMUA_Achr11G17770_001
I
GSMUA_Achr3G31070_001
Musa acuminata
GSMUA_Achr3G31070_001
I
GSMUA_Achr6G27250_001
Musa acuminata
GSMUA_Achr6G27250_001
I
GSMUA_Achr7G09030_001
Musa acuminata
GSMUA_Achr7G09030_001
I
GSMUA_Achr7G25620_001
Musa acuminata
GSMUA_Achr7G25620_001
I
OBART01G25510
Oryza barthii
OBART01G25510
I
OBART05G26150
Oryza barthii
OBART05G26150
I
OB01G34710
Oryza brachyantha
OB01G34710
I
OB05G34480
Oryza brachyantha
OB05G34480
I
ORGLA01G0208300
Oryza glaberrima
ORGLA01G0208300
I
ORGLA05G0226400
Oryza glaberrima
ORGLA05G0226400
I
ORGLA05G0233700
Oryza glaberrima
ORGLA05G0233700
I
OGLUM01G29320
Oryza glumaepatula
OGLUM01G29320
I
OGLUM05G27770
Oryza glumaepatula
OGLUM05G27770
I
OGLUM05G28510
Oryza glumaepatula
OGLUM05G28510
I
BGIOSGA001076
Oryza indica
BGIOSGA001076
I
BGIOSGA017544
Oryza indica
BGIOSGA017544
I
GATA15
Oryza indica
BGIOSGA020424
I
OMERI01G23200
Oryza meridionalis
OMERI01G23200
I
OMERI03G30220
Oryza meridionalis
OMERI03G30220
I
OMERI05G23010
Oryza meridionalis
OMERI05G23010
I
ONIVA01G28750
Oryza nivara
ONIVA01G28750
I
ONIVA05G29020
Oryza nivara
ONIVA05G29020
I
OPUNC01G25380
Oryza punctata
OPUNC01G25380
I
OPUNC05G23750
Oryza punctata
OPUNC05G23750
I
OPUNC05G24550
Oryza punctata
OPUNC05G24550
I
ORUFI01G28370
Oryza rufipogon
ORUFI01G28370
I
ORUFI05G28050
Oryza rufipogon
ORUFI05G28050
I
ORUFI05G28920
Oryza rufipogon
ORUFI05G28920
I
OS01G0662800
Oryza sativa
OS01G0662800
I
OS05G0567900
Oryza sativa
OS05G0567900
I
GATA15
Oryza sativa
OS05G0578900
I
Pavir.Ca00998
Panicum virgatum
Pavir.Ca00998
I
Pavir.Ea02338
Panicum virgatum
Pavir.Ea02338
I
Pavir.Eb02678
Panicum virgatum
Pavir.Eb02678
I
Pavir.J03293
Panicum virgatum
Pavir.J03293
I
Pavir.J18346
Panicum virgatum
Pavir.J18346
I
Pavir.J26908
Panicum virgatum
Pavir.J26908
I
POPTR_0005s12440
Populus trichocarpa
POPTR_0005s12440
I
POPTR_0007s12930
Populus trichocarpa
POPTR_0007s12930
I
Pm026628
Prunus mume
Pm026628
I
PRUPE_ppa014930mg
Prunus persica
PRUPE_ppa014930mg
I
29634.m002146
Ricinus communis
29634.m002146
I
SapurV1A.0254s0200
Salix purpurea
SapurV1A.0254s0200
I
SapurV1A.0978s0140
Salix purpurea
SapurV1A.0978s0140
I
Si022366m.g
Setaria italica
Si022366m.g
I
Si024214m.g
Setaria italica
Si024214m.g
I
Solyc02g085190.1
Solanum lycopersicum
Solyc02g085190.1
I
PGSC0003DMG400003508
Solanum tuberosum
PGSC0003DMG400003508
I
PGSC0003DMG400015502
Solanum tuberosum
PGSC0003DMG400015502
I
Sb03g030310
Sorghum bicolor
Sb03g030310
I
Sb09g028850
Sorghum bicolor
Sb09g028850
I
Sb09g029510
Sorghum bicolor
Sb09g029510
I
TCM_000376
Theobroma cacao
TCM_000376
I
Traes_1AL_A1EA76E83
Triticum aestivum
Traes_1AL_A1EA76E83
I
TRAES3BF091700010CFD_g
Triticum aestivum
TRAES3BF091700010CFD_g
I
MNP
Vitis vinifera
VIT_04s0023g01840
I
GRMZM2G123909
Zea mays
GRMZM2G123909
I
GRMZM2G325850
Zea mays
GRMZM2G325850
I
GRMZM2G397616
Zea mays
GRMZM2G397616
I