ATF3 (Pteropus vampyrus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSPVAG00000011826 T061272_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATF3
M04321_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_HT-SELEX 		0.823 0.607
ATF3
M04323_2.00 		Homo sapiens
NRTGACGTCAYN
NRTGACGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_HT-SELEX 		0.823 0.607
ATF3
M04032_2.00 		Homo sapiens
RTGACGTCAK
MTGACGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.1 		0.823 0.607
ATF3
M04033_2.00 		Homo sapiens
RTGACTCAY
RTGAGTCAY		 SELEX
Rodriguez-Martinez et al.(2017)
ATF3.2 		0.823 0.607
ATF3
M07822_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
GM12878_ATF3_HudsonAlpha 		0.823 0.607
ATF3
M07823_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
H1-hESC_ATF3_HudsonAlpha 		0.823 0.607
ATF3
M07824_2.00 		Homo sapiens
VGTCACGTGRB
VYCACGTGACB		 ChIP-seq
Gerstein et al.(2012)
HepG2_ATF3_HudsonAlpha 		0.823 0.607
ATF3
M07825_2.00 		Homo sapiens
VRTSACGTVR
YBACGTSAYB		 ChIP-seq
Gerstein et al.(2012)
K562_ATF3_Harvard 		0.823 0.607
ATF3
M08187_2.00 		Homo sapiens
GTCACGTG
CACGTGAC		 ChIP-seq
Contrino et al.(2012)
Mv41 		0.823 0.607
ATF3
M08188_2.00 		Homo sapiens
NRTGASTCAY
RTGASTCAYN		 ChIP-seq
Contrino et al.(2012)
Mv43 		0.823 0.607
ATF3
M08801_2.00 		Homo sapiens
RRTSACGTVRB
VYBACGTSAYY		 Misc
Kulakovskiy et al.(2013)
ATF3_HUMAN.H11MO.0.A 		0.823 0.607
ATF3
M09489_2.00 		Homo sapiens
NVTGASTCABNN
NNVTGASTCABN		 Misc
Heinz et al.(2010)
GBM-ATF3_GSE33912 		0.823 0.607
ATF3
M09977_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_02 		0.823 0.607
ATF3
M09978_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_05 		0.823 0.607
ATF3
M09979_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_01 		0.823 0.607
ATF3
M09980_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6_02 		0.823 0.607
ATF3
M09981_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$ATF3_Q6 		0.823 0.607
ATF3
M04322_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_eDBD_Methyl-HT-SELEX 		0.823 0.607
ATF3
M04324_2.00 		Homo sapiens
NRTGACRTCAYH
DRTGAYGTCAYN		 SELEX
Yin et al.(2017)
ATF3_FL_Methyl-HT-SELEX 		0.823 0.607
Atf3
M00758_2.00 		Mus musculus
NNRTKAYNN
NNRTMAYNN		 PBM
Weirauch et al.(2013)
pTH2684 		0.797 0.589
Atf3
M01807_2.00 		Mus musculus
GATGACGY
RCGTCATC		 PBM
Weirauch et al.(2014)
pTH5018 		0.797 0.589
Atf3
M08825_2.00 		Mus musculus
VTGACTCAB
VTGAGTCAB		 Misc
Kulakovskiy et al.(2013)
ATF3_MOUSE.H11MO.0.A 		0.797 0.589
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPVAP00000011149 bZIP 84 140

Links

Other bZIP family TFs
Other Pteropus vampyrus TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_009_00676 Aquilegia coerulea Aquca_009_00676 N
NF-YA10 Arabidopsis lyrata scaffold_600636.1 N
NFYA5 Arabidopsis lyrata Al_scaffold_0001_4860 N
UNE8 Arabidopsis lyrata fgenesh2_kg.3__563__AT3G05690.1 N
HAP2C Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001597 N
NFYA5 Arabidopsis thaliana AT1G54160 N
NFYA10 Arabidopsis thaliana AT5G06510 N
HAP2C Arabidopsis thaliana AT1G72830 N
UNE8 Arabidopsis thaliana AT3G05690 N
Bostr.7128s0065 Boechera stricta Bostr.7128s0065 N
Bostr.13129s0320 Boechera stricta Bostr.13129s0320 N
Bo5g145140 Brassica oleracea Bo5g145140 N
Bo9g176100 Brassica oleracea Bo9g176100 N
Bo1g150420 Brassica oleracea Bo1g150420 N
Bo3g060160 Brassica oleracea Bo3g060160 N
Bra001164 Brassica rapa Bra001164 N
Bra009200 Brassica rapa Bra009200 N
Bra040529 Brassica rapa Bra040529 N
PK20005.1 Cannabis sativa PK20005.1 N
PK26326.1 Cannabis sativa PK26326.1 N
Cagra.2117s0012 Capsella grandiflora Cagra.2117s0012 N
Cagra.2108s0005 Capsella grandiflora Cagra.2108s0005 N
Cagra.20869s0002 Capsella grandiflora Cagra.20869s0002 N
Carubv10001713m.g Capsella rubella Carubv10001713m.g N
Carubv10009883m.g Capsella rubella Carubv10009883m.g N
Carubv10014086m.g Capsella rubella Carubv10014086m.g N
evm.TU.supercontig_104.9 Carica papaya evm.TU.supercontig_104.9 N
evm.TU.supercontig_25.96 Carica papaya evm.TU.supercontig_25.96 N
Ca_14455 Cicer arietinum Ca_14455 N
Ca_11593 Cicer arietinum Ca_11593 N
Ca_10039 Cicer arietinum Ca_10039 N
Ca_00866 Cicer arietinum Ca_00866 N
Cla017115 Citrullus lanatus Cla017115 N
Cla017884 Citrullus lanatus Cla017884 N
Ciclev10012232m.g Citrus clementina Ciclev10012232m.g N
orange1.1g021081m.g Citrus sinensis orange1.1g021081m.g N
Cucsa.241980 Cucumis sativus Cucsa.241980 N
Eucgr.C00842 Eucalyptus grandis Eucgr.C00842 N
Eucgr.A02570 Eucalyptus grandis Eucgr.A02570 N
Thhalv10021244m.g Eutrema salsugineum Thhalv10021244m.g N
Thhalv10014346m.g Eutrema salsugineum Thhalv10014346m.g N
gene12709-v1.0-hybrid Fragaria vesca gene12709-v1.0-hybrid N
gene18295-v1.0-hybrid Fragaria vesca gene18295-v1.0-hybrid N
GLYMA17G05920 Glycine max GLYMA17G05920 I
GLYMA09G07960 Glycine max GLYMA09G07960 I
GLYMA07G04050 Glycine max GLYMA07G04050 I
GLYMA19G38800 Glycine max GLYMA19G38800 N
GLYMA03G36140 Glycine max GLYMA03G36140 N
GLYMA02G35190 Glycine max GLYMA02G35190 N
GLYMA16G00711 Glycine max GLYMA16G00711 I
GLYMA15G18970 Glycine max GLYMA15G18970 I
GLYMA13G16770 Glycine max GLYMA13G16770 N
GLYMA10G10240 Glycine max GLYMA10G10240 N
Gorai.002G234400 Gossypium raimondii Gorai.002G234400 N
Gorai.007G363800 Gossypium raimondii Gorai.007G363800 N
Gorai.009G143800 Gossypium raimondii Gorai.009G143800 N
Gorai.012G010900 Gossypium raimondii Gorai.012G010900 N
Lus10013592.g Linum usitatissimum Lus10013592.g N
Lus10021259.g Linum usitatissimum Lus10021259.g N
LjT30L14.130.nd Lotus japonicus LjT30L14.130.nd N
chr1.CM0361.430.nc Lotus japonicus chr1.CM0361.430.nc N
chr3.CM0724.30.nd Lotus japonicus chr3.CM0724.30.nd I
chr5.CM0571.20.nd Lotus japonicus chr5.CM0571.20.nd N
LjSGA_058509.1 Lotus japonicus LjSGA_058509.1 N
MDP0000948645 Malus domestica MDP0000948645 N
MDP0000827821 Malus domestica MDP0000827821 N
MDP0000785523 Malus domestica MDP0000785523 N
MDP0000588222 Malus domestica MDP0000588222 N
MDP0000375005 Malus domestica MDP0000375005 N
MDP0000279028 Malus domestica MDP0000279028 N
MDP0000183865 Malus domestica MDP0000183865 I
MDP0000129029 Malus domestica MDP0000129029 N
MTR_1g056530 Medicago truncatula MTR_1g056530 N
MTR_2g041090 Medicago truncatula MTR_2g041090 N
MTR_7g106450 Medicago truncatula MTR_7g106450 N
MTR_8g019540 Medicago truncatula MTR_8g019540 I
GSMUA_Achr7G07860_001 Musa acuminata GSMUA_Achr7G07860_001 N
POPTR_0006s14740 Populus trichocarpa POPTR_0006s14740 N
POPTR_0018s07220 Populus trichocarpa POPTR_0018s07220 N
POPTR_0016s06860 Populus trichocarpa POPTR_0016s06860 N
POPTR_0006s21640 Populus trichocarpa POPTR_0006s21640 N
Pm027028 Prunus mume Pm027028 N
Pm026038 Prunus mume Pm026038 N
PRUPE_ppa017366mg Prunus persica PRUPE_ppa017366mg N
PRUPE_ppa016008mg Prunus persica PRUPE_ppa016008mg N
29333.m001059 Ricinus communis 29333.m001059 N
29912.m005288 Ricinus communis 29912.m005288 N
SapurV1A.0258s0010 Salix purpurea SapurV1A.0258s0010 N
SapurV1A.0980s0030 Salix purpurea SapurV1A.0980s0030 N
SapurV1A.1209s0040 Salix purpurea SapurV1A.1209s0040 N
Si019645m.g Setaria italica Si019645m.g N
Solyc12g009050.1 Solanum lycopersicum Solyc12g009050.1 N
PGSC0003DMG400000272 Solanum tuberosum PGSC0003DMG400000272 N
TCM_037576 Theobroma cacao TCM_037576 N
TCM_022984 Theobroma cacao TCM_022984 N
VIT_11s0016g01480 Vitis vinifera VIT_11s0016g01480 N
VIT_08s0032g01190 Vitis vinifera VIT_08s0032g01190 N
GRMZM5G857944 Zea mays GRMZM5G857944 N