TEF (Sorex araneus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 ENSSARG00000003323 T061343_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.891 1.000
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.891 1.000
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.891 1.000
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.891 1.000
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.891 1.000
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.891 1.000
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.891 1.000
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.891 1.000
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.891 1.000
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.847 0.781
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.847 0.781
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.847 0.781
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.847 0.781
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.847 0.781
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.847 0.781
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.847 0.781
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.847 0.781
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSSARP00000002982 bZIP 229 292

Links

Other bZIP family TFs
Other Sorex araneus TFs

184 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_00859 Aegilops tauschii F775_00859 I
F775_42893 Aegilops tauschii F775_42893 I
AMTR_s00011p00253850 Amborella trichopoda AMTR_s00011p00253850 I
Aquca_007_00224 Aquilegia coerulea Aquca_007_00224 I
Aquca_010_00506 Aquilegia coerulea Aquca_010_00506 I
GATA20 Arabidopsis lyrata Al_scaffold_0003_3815 I
MNP Arabidopsis lyrata Al_scaffold_0005_1952 I
GATA19 Arabidopsis lyrata fgenesh2_kg.7__409__AT4G36620.1 I
GATA20 Arabidopsis thaliana AT2G18380 D
GATA18 Arabidopsis thaliana AT3G50870 I
GATA19 Arabidopsis thaliana AT4G36620 D
Bostr.18351s0307 Boechera stricta Bostr.18351s0307 I
Bostr.6864s0159 Boechera stricta Bostr.6864s0159 I
Bostr.7867s1518 Boechera stricta Bostr.7867s1518 I
BRADI2G14890 Brachypodium distachyon BRADI2G14890 I
BRADI2G45750 Brachypodium distachyon BRADI2G45750 I
Bo1g005530 Brassica oleracea Bo1g005530 I
Bo3g019610 Brassica oleracea Bo3g019610 I
Bo7g010220 Brassica oleracea Bo7g010220 I
Bo7g064860 Brassica oleracea Bo7g064860 I
Bo7g100580 Brassica oleracea Bo7g100580 I
Bo7g118030 Brassica oleracea Bo7g118030 I
Bo8g080330 Brassica oleracea Bo8g080330 I
Bo9g026020 Brassica oleracea Bo9g026020 I
Bra006851 Brassica rapa Bra006851 I
Bra010563 Brassica rapa Bra010563 I
Bra011695 Brassica rapa Bra011695 I
Bra012080 Brassica rapa Bra012080 I
Bra012883 Brassica rapa Bra012883 I
Bra017766 Brassica rapa Bra017766 I
Bra036854 Brassica rapa Bra036854 I
Bra037221 Brassica rapa Bra037221 I
Bra039614 Brassica rapa Bra039614 I
PK24471.1 Cannabis sativa PK24471.1 I
Cagra.0926s0051 Capsella grandiflora Cagra.0926s0051 I
Carubv10007612m.g Capsella rubella Carubv10007612m.g I
Carubv10014541m.g Capsella rubella Carubv10014541m.g I
Carubv10017765m.g Capsella rubella Carubv10017765m.g I
evm.TU.supercontig_6.118 Carica papaya evm.TU.supercontig_6.118 I
Ca_02038 Cicer arietinum Ca_02038 I
Ca_16057 Cicer arietinum Ca_16057 I
Cla014435 Citrullus lanatus Cla014435 I
Cla014810 Citrullus lanatus Cla014810 I
Ciclev10026328m.g Citrus clementina Ciclev10026328m.g I
Cucsa.106490 Cucumis sativus Cucsa.106490 I
Cucsa.127470 Cucumis sativus Cucsa.127470 I
Thhalv10010986m.g Eutrema salsugineum Thhalv10010986m.g I
Thhalv10022854m.g Eutrema salsugineum Thhalv10022854m.g I
Thhalv10027520m.g Eutrema salsugineum Thhalv10027520m.g I
gene14763-v1.0-hybrid Fragaria vesca gene14763-v1.0-hybrid I
GLYMA02G06320 Glycine max GLYMA02G06320 I
GLYMA11G07350 Glycine max GLYMA11G07350 I
GLYMA11G25375 Glycine max GLYMA11G25375 I
GLYMA16G25370 Glycine max GLYMA16G25370 I
Gorai.003G014300 Gossypium raimondii Gorai.003G014300 I
Gorai.007G202900 Gossypium raimondii Gorai.007G202900 I
Gorai.008G067800 Gossypium raimondii Gorai.008G067800 I
MLOC_5372 Hordeum vulgare MLOC_5372 I
MLOC_62522 Hordeum vulgare MLOC_62522 I
LPERR01G21790 Leersia perrieri LPERR01G21790 I
LPERR05G21780 Leersia perrieri LPERR05G21780 I
LPERR05G22620 Leersia perrieri LPERR05G22620 I
Lus10028301.g Linum usitatissimum Lus10028301.g I
chr2.CM0249.1330.nc Lotus japonicus chr2.CM0249.1330.nc I
chr4.CM0283.270.nd Lotus japonicus chr4.CM0283.270.nd I
MDP0000253174 Malus domestica MDP0000253174 I
MDP0000310271 Malus domestica MDP0000310271 I
cassava21185.m1 Manihot esculenta cassava21185.m1 I
cassava5664.m1 Manihot esculenta cassava5664.m1 I
MTR_8g077510 Medicago truncatula MTR_8g077510 I
mgf023982m Mimulus guttatus mgf023982m I
GSMUA_Achr11G17770_001 Musa acuminata GSMUA_Achr11G17770_001 I
GSMUA_Achr3G31070_001 Musa acuminata GSMUA_Achr3G31070_001 I
GSMUA_Achr6G27250_001 Musa acuminata GSMUA_Achr6G27250_001 I
GSMUA_Achr7G09030_001 Musa acuminata GSMUA_Achr7G09030_001 I
GSMUA_Achr7G25620_001 Musa acuminata GSMUA_Achr7G25620_001 I
OBART01G25510 Oryza barthii OBART01G25510 I
OBART05G26150 Oryza barthii OBART05G26150 I
OB01G34710 Oryza brachyantha OB01G34710 I
OB05G34480 Oryza brachyantha OB05G34480 I
ORGLA01G0208300 Oryza glaberrima ORGLA01G0208300 I
ORGLA05G0226400 Oryza glaberrima ORGLA05G0226400 I
ORGLA05G0233700 Oryza glaberrima ORGLA05G0233700 I
OGLUM01G29320 Oryza glumaepatula OGLUM01G29320 I
OGLUM05G27770 Oryza glumaepatula OGLUM05G27770 I
OGLUM05G28510 Oryza glumaepatula OGLUM05G28510 I
BGIOSGA001076 Oryza indica BGIOSGA001076 I
BGIOSGA017544 Oryza indica BGIOSGA017544 I
GATA15 Oryza indica BGIOSGA020424 I
OMERI01G23200 Oryza meridionalis OMERI01G23200 I
OMERI03G30220 Oryza meridionalis OMERI03G30220 I
OMERI05G23010 Oryza meridionalis OMERI05G23010 I
ONIVA01G28750 Oryza nivara ONIVA01G28750 I
ONIVA05G29020 Oryza nivara ONIVA05G29020 I
OPUNC01G25380 Oryza punctata OPUNC01G25380 I
OPUNC05G23750 Oryza punctata OPUNC05G23750 I
OPUNC05G24550 Oryza punctata OPUNC05G24550 I
ORUFI01G28370 Oryza rufipogon ORUFI01G28370 I
ORUFI05G28050 Oryza rufipogon ORUFI05G28050 I
ORUFI05G28920 Oryza rufipogon ORUFI05G28920 I
OS01G0662800 Oryza sativa OS01G0662800 I
OS05G0567900 Oryza sativa OS05G0567900 I
GATA15 Oryza sativa OS05G0578900 I
Pavir.Ca00998 Panicum virgatum Pavir.Ca00998 I
Pavir.Ea02338 Panicum virgatum Pavir.Ea02338 I
Pavir.Eb02678 Panicum virgatum Pavir.Eb02678 I
Pavir.J03293 Panicum virgatum Pavir.J03293 I
Pavir.J18346 Panicum virgatum Pavir.J18346 I
Pavir.J26908 Panicum virgatum Pavir.J26908 I
POPTR_0005s12440 Populus trichocarpa POPTR_0005s12440 I
POPTR_0007s12930 Populus trichocarpa POPTR_0007s12930 I
Pm026628 Prunus mume Pm026628 I
PRUPE_ppa014930mg Prunus persica PRUPE_ppa014930mg I
29634.m002146 Ricinus communis 29634.m002146 I
SapurV1A.0254s0200 Salix purpurea SapurV1A.0254s0200 I
SapurV1A.0978s0140 Salix purpurea SapurV1A.0978s0140 I
Si022366m.g Setaria italica Si022366m.g I
Si024214m.g Setaria italica Si024214m.g I
Solyc02g062760.2 Solanum lycopersicum Solyc02g062760.2 I
Solyc02g085190.1 Solanum lycopersicum Solyc02g085190.1 I
PGSC0003DMG400003508 Solanum tuberosum PGSC0003DMG400003508 I
PGSC0003DMG400015502 Solanum tuberosum PGSC0003DMG400015502 I
Sb03g030310 Sorghum bicolor Sb03g030310 I
Sb09g028850 Sorghum bicolor Sb09g028850 I
Sb09g029510 Sorghum bicolor Sb09g029510 I
TCM_000376 Theobroma cacao TCM_000376 I
Traes_1AL_A1EA76E83 Triticum aestivum Traes_1AL_A1EA76E83 I
TRAES3BF091700010CFD_g Triticum aestivum TRAES3BF091700010CFD_g I
MNP Vitis vinifera VIT_04s0023g01840 I
GRMZM2G123909 Zea mays GRMZM2G123909 I
GRMZM2G325850 Zea mays GRMZM2G325850 I
GRMZM2G397616 Zea mays GRMZM2G397616 I