POPTR_0002s06800 (Populus trichocarpa)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00170 (bZIP_1) IPR011616 POPTR_0002s06800 T066928_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LOC_Os05g36160
M01825_2.00 		Oryza sativa
MCACGTGK
MCACGTGK		 PBM
Weirauch et al.(2014)
pTH8599 		0.796 0.609
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0002s06800.1 bZIP 230 293
POPTR_0002s06800.2 bZIP 230 293

Links

Other bZIP family TFs
Other Populus trichocarpa TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_32479 Aegilops tauschii F775_32479 I 0.797
AMTR_s00040p00057740 Amborella trichopoda AMTR_s00040p00057740 I 0.799
Aquca_023_00151 Aquilegia coerulea Aquca_023_00151 I 0.785
Al_scaffold_0007_1421 Arabidopsis lyrata Al_scaffold_0007_1421 N 0.810
fgenesh2_kg.1__328__AT1G03970.1 Arabidopsis lyrata fgenesh2_kg.1__328__AT1G03970.1 N 0.852
fgenesh2_kg.8__404__AT5G44080.1 Arabidopsis lyrata fgenesh2_kg.8__404__AT5G44080.1 N 0.821
scaffold_105455.1 Arabidopsis lyrata scaffold_105455.1 N 0.810
GBF4 Arabidopsis thaliana AT1G03970 N 0.852
AT5G44080 Arabidopsis thaliana AT5G44080 N 0.821
Bostr.26675s0358 Boechera stricta Bostr.26675s0358 N 0.842
Bostr.3148s0051 Boechera stricta Bostr.3148s0051 N 0.821
Bo5g004230 Brassica oleracea Bo5g004230 N 0.862
Bo7g067030 Brassica oleracea Bo7g067030 N 0.832
Bra015281 Brassica rapa Bra015281 N 0.862
PK16522.1 Cannabis sativa PK16522.1 N 0.807
PK22350.1 Cannabis sativa PK22350.1 N 0.789
Cagra.12696s0002 Capsella grandiflora Cagra.12696s0002 N 0.812
Cagra.1671s0014 Capsella grandiflora Cagra.1671s0014 N 0.843
Carubv10011573m.g Capsella rubella Carubv10011573m.g N 0.843
Carubv10027647m.g Capsella rubella Carubv10027647m.g N 0.821
evm.TU.supercontig_21.207 Carica papaya evm.TU.supercontig_21.207 N 0.811
Ca_04375 Cicer arietinum Ca_04375 N 0.811
Cla014026 Citrullus lanatus Cla014026 N 0.803
Ciclev10002029m.g Citrus clementina Ciclev10002029m.g I 0.799
Ciclev10002059m.g Citrus clementina Ciclev10002059m.g I 0.827
orange1.1g025985m.g Citrus sinensis orange1.1g025985m.g I 0.827
Cucsa.363740 Cucumis sativus Cucsa.363740 I 0.827
Thhalv10003246m.g Eutrema salsugineum Thhalv10003246m.g N 0.825
Thhalv10009710m.g Eutrema salsugineum Thhalv10009710m.g N 0.864
gene08154-v1.0-hybrid Fragaria vesca gene08154-v1.0-hybrid N 0.815
gene11837-v1.0-hybrid Fragaria vesca gene11837-v1.0-hybrid N 0.789
GLYMA05G25200 Glycine max GLYMA05G25200 I 0.798
GLYMA08G08220 Glycine max GLYMA08G08220 N 0.814
GLYMA10G36820 Glycine max GLYMA10G36820 N 0.861
Gorai.002G207000 Gossypium raimondii Gorai.002G207000 I 0.799
Gorai.005G078500 Gossypium raimondii Gorai.005G078500 N 0.799
Gorai.005G259700 Gossypium raimondii Gorai.005G259700 I 0.820
Gorai.009G275700 Gossypium raimondii Gorai.009G275700 I 0.782
MLOC_34679 Hordeum vulgare MLOC_34679 I 0.797
LPERR01G32620 Leersia perrieri LPERR01G32620 I 0.799
LPERR05G14180 Leersia perrieri LPERR05G14180 I 0.796
Lus10014194.g Linum usitatissimum Lus10014194.g I 0.782
Lus10022720.g Linum usitatissimum Lus10022720.g I 0.782
Lus10028575.g Linum usitatissimum Lus10028575.g N 0.850
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N 0.823
MDP0000208334 Malus domestica MDP0000208334 N 0.848
MDP0000706379 Malus domestica MDP0000706379 I 0.800
cassava12750.valid.m1 Manihot esculenta cassava12750.valid.m1 I 0.822
MTR_1g098590 Medicago truncatula MTR_1g098590 N 0.861
MTR_4g094390 Medicago truncatula MTR_4g094390 I 0.790
mgf008848m Mimulus guttatus mgf008848m N 0.831
mgf009464m Mimulus guttatus mgf009464m N 0.800
mgf015540m Mimulus guttatus mgf015540m I 0.821
GSMUA_Achr10G10440_001 Musa acuminata GSMUA_Achr10G10440_001 I 0.812
GSMUA_Achr3G22470_001 Musa acuminata GSMUA_Achr3G22470_001 I 0.830
GSMUA_Achr9G08900_001 Musa acuminata GSMUA_Achr9G08900_001 N 0.810
OBART01G37980 Oryza barthii OBART01G37980 I 0.799
OBART05G17920 Oryza barthii OBART05G17920 I 0.796
OB01G46760 Oryza brachyantha OB01G46760 I 0.799
OB05G25740 Oryza brachyantha OB05G25740 I 0.791
ORGLA01G0317900 Oryza glaberrima ORGLA01G0317900 I 0.799
ORGLA05G0154900 Oryza glaberrima ORGLA05G0154900 I 0.796
OGLUM01G42150 Oryza glumaepatula OGLUM01G42150 I 0.799
OGLUM05G18920 Oryza glumaepatula OGLUM05G18920 I 0.796
BGIOSGA004837 Oryza indica BGIOSGA004837 I 0.799
BGIOSGA019930 Oryza indica BGIOSGA019930 I 0.788
OLONG_014546 Oryza longistaminata OLONG_014546 I 0.799
OMERI01G34950 Oryza meridionalis OMERI01G34950 I 0.799
OMERI05G15500 Oryza meridionalis OMERI05G15500 I 0.796
ONIVA04G25730 Oryza nivara ONIVA04G25730 I 0.799
ONIVA05G18780 Oryza nivara ONIVA05G18780 I 0.796
OPUNC01G36800 Oryza punctata OPUNC01G36800 I 0.784
OPUNC05G15820 Oryza punctata OPUNC05G15820 I 0.793
ORUFI01G41310 Oryza rufipogon ORUFI01G41310 I 0.799
ORUFI05G19090 Oryza rufipogon ORUFI05G19090 I 0.796
LOC_Os05g36160 Oryza sativa LOC_Os05g36160 D 0.796
OS01G0859300 Oryza sativa OS01G0859300 I 0.799
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I 0.795
Pavir.J06257 Panicum virgatum Pavir.J06257 I 0.819
Pavir.J35078 Panicum virgatum Pavir.J35078 I 0.799
Pavir.J36143 Panicum virgatum Pavir.J36143 I 0.819
POPTR_0005s21500 Populus trichocarpa POPTR_0005s21500 I 0.879
Pm022545 Prunus mume Pm022545 I 0.818
29625.m000702 Ricinus communis 29625.m000702 I 0.782
29863.m001047 Ricinus communis 29863.m001047 N 0.809
SapurV1A.0134s0060 Salix purpurea SapurV1A.0134s0060 I 0.879
SapurV1A.0625s0150 Salix purpurea SapurV1A.0625s0150 I 0.879
SapurV1A.5129s0010 Salix purpurea SapurV1A.5129s0010 I 0.818
Si003247m.g Setaria italica Si003247m.g I 0.795
Solyc01g104650.2 Solanum lycopersicum Solyc01g104650.2 I 0.793
Solyc04g071510.2 Solanum lycopersicum Solyc04g071510.2 I 0.809
PGSC0003DMG400006211 Solanum tuberosum PGSC0003DMG400006211 I 0.783
PGSC0003DMG400029774 Solanum tuberosum PGSC0003DMG400029774 I 0.793
Sb03g040970 Sorghum bicolor Sb03g040970 I 0.795
TCM_006432 Theobroma cacao TCM_006432 I 0.799
TCM_035623 Theobroma cacao TCM_035623 N 0.826
Traes_3AL_FC5523394 Triticum aestivum Traes_3AL_FC5523394 I 0.797
TRAES3BF111600130CFD_g Triticum aestivum TRAES3BF111600130CFD_g I 0.797
TRIUR3_31111 Triticum urartu TRIUR3_31111 I 0.785
TRIUR3_33995 Triticum urartu TRIUR3_33995 I 0.784
VIT_12s0055g00420 Vitis vinifera VIT_12s0055g00420 I 0.785
VIT_18s0072g00470 Vitis vinifera VIT_18s0072g00470 N 0.811
GRMZM2G132868 Zea mays GRMZM2G132868 I 0.819
GRMZM2G168079 Zea mays GRMZM2G168079 I 0.799
GRMZM5G858197 Zea mays GRMZM5G858197 I 0.795