Afo_R002997 (Aptenodytes forsteri)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Afo_R002997 T069797_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
HLF
M02831_2.00 		Homo sapiens
NRTTAYRTAABN
NVTTAYRTAAYN		 SELEX
Jolma et al.(2013)
HLF_1 		0.893 0.984
Hlf
M02860_2.00 		Mus musculus
KRTTACGTAAYN
NRTTACGTAAYM		 SELEX
Jolma et al.(2013)
Hlf_1 		0.893 0.984
HLF
M04245_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_HT-SELEX 		0.893 0.984
HLF
M04016_2.00 		Homo sapiens
RTKAYRTAAB
VTTAYRTMAY		 SELEX
Rodriguez-Martinez et al.(2017)
HLF.1 		0.893 0.984
HLF
M08786_2.00 		Homo sapiens
NRTTRYGTAAYMS
SKRTTACRYAAYN		 Misc
Kulakovskiy et al.(2013)
HLF_HUMAN.H11MO.0.C 		0.893 0.984
Hlf
M08815_2.00 		Mus musculus
VTTRTGYAABH
DVTTRCAYAAB		 Misc
Kulakovskiy et al.(2013)
HLF_MOUSE.H11MO.0.C 		0.893 0.984
HLF
M09937_2.00 		Homo sapiens
ATKRYGTAAY
RTTACRYMAT		 Transfac
Matys et al.(2006)
V$HLF_01 		0.893 0.984
HLF
M04246_2.00 		Homo sapiens
NVTTRCRYAABN
NVTTRYGYAABN		 SELEX
Yin et al.(2017)
HLF_FL_Methyl-HT-SELEX 		0.893 0.984
Tef
M01803_2.00 		Mus musculus
NVTTRYVNNN
NNNBRYAABN		 PBM
Weirauch et al.(2014)
pTH5078 		0.844 0.790
TEF
M02849_2.00 		Homo sapiens
NRTTAYGTAAYN
NRTTACRTAAYN		 SELEX
Jolma et al.(2013)
TEF_1 		0.844 0.790
TEF
M02850_2.00 		Homo sapiens
NVTTAYGTAABN
NVTTACRTAABN		 SELEX
Jolma et al.(2013)
TEF_2 		0.844 0.790
TEF
M04325_2.00 		Homo sapiens
NRTTACGTAAYN
NRTTACGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_HT-SELEX 		0.844 0.790
TEF
M09983_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_05 		0.844 0.790
TEF
M09984_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_06 		0.844 0.790
TEF
M09985_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TEF_Q6 		0.844 0.790
TEF
M09986_2.00 		Homo sapiens
MTKAYGTAAY
RTTACRTMAK		 Transfac
Matys et al.(2006)
V$VBP_01 		0.844 0.790
TEF
M04326_2.00 		Homo sapiens
NRTTACRTAAYN
NRTTAYGTAAYN		 SELEX
Yin et al.(2017)
TEF_eDBD_Methyl-HT-SELEX 		0.844 0.790
Pdp1
M03645_2.00 		Drosophila melanogaster
VTTACGTAAB
VTTACGTAAB		 SELEX
Nitta et al.(2015)
Pdp1_1 		0.795 0.694
Pdp1
M03646_2.00 		Drosophila melanogaster
RTTACGTAAY
RTTACGTAAY		 SELEX
Nitta et al.(2015)
Pdp1_2 		0.795 0.694
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R002997 bZIP 177 238

Links

Other bZIP family TFs
Other Aptenodytes forsteri TFs

231 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_027_00443 Aquilegia coerulea Aquca_027_00443 I 0.000
AT1G19490 Arabidopsis thaliana AT1G19490 D 0.000
Bo5g027510 Brassica oleracea Bo5g027510 I 0.000
Bra025743 Brassica rapa Bra025743 I 0.000
PK09783.1 Cannabis sativa PK09783.1 I 0.000
Cagra.1961s0053 Capsella grandiflora Cagra.1961s0053 I 0.000
Carubv10011417m.g Capsella rubella Carubv10011417m.g I 0.000
evm.TU.supercontig_5.51 Carica papaya evm.TU.supercontig_5.51 I 0.000
Ca_00780 Cicer arietinum Ca_00780 I 0.000
Cla017983 Citrullus lanatus Cla017983 I 0.000
Ciclev10013541m.g Citrus clementina Ciclev10013541m.g I 0.000
orange1.1g011345m.g Citrus sinensis orange1.1g011345m.g I 0.000
Cucsa.240980 Cucumis sativus Cucsa.240980 I 0.000
Thhalv10009681m.g Eutrema salsugineum Thhalv10009681m.g I 0.000
gene30252-v1.0-hybrid Fragaria vesca gene30252-v1.0-hybrid I 0.000
GLYMA03G35101 Glycine max GLYMA03G35101 I 0.000
GLYMA19G37801 Glycine max GLYMA19G37801 I 0.000
Gorai.009G405400 Gossypium raimondii Gorai.009G405400 I 0.000
Lus10003255.g Linum usitatissimum Lus10003255.g I 0.000
Lus10035597.g Linum usitatissimum Lus10035597.g I 0.000
MDP0000147745 Malus domestica MDP0000147745 I 0.000
MDP0000203904 Malus domestica MDP0000203904 I 0.000
cassava31755.valid.m1 Manihot esculenta cassava31755.valid.m1 I 0.000
MTR_7g104190 Medicago truncatula MTR_7g104190 I 0.000
POPTR_0006s11550 Populus trichocarpa POPTR_0006s11550 I 0.000
PRUPE_ppa003901mg Prunus persica PRUPE_ppa003901mg I 0.000
28779.m000140 Ricinus communis 28779.m000140 I 0.000
SapurV1A.0208s0130 Salix purpurea SapurV1A.0208s0130 I 0.000
Solyc09g009760.1 Solanum lycopersicum Solyc09g009760.1 I 0.000
TCM_022516 Theobroma cacao TCM_022516 I 0.000
VIT_08s0007g03640 Vitis vinifera VIT_08s0007g03640 I 0.000