Cla008074 (Citrullus lanatus)
bZIP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00170 (bZIP_1) IPR011616 Cla008074 T070002_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ATBZIP42
M06775_2.00 		Arabidopsis thaliana
TGCTGACGTGGM
KCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_col_a 		0.797 0.677
ATBZIP42
M06776_2.00 		Arabidopsis thaliana
TGCTGACGTGGCV
BGCCACGTCAGCA		 Dap-seq
OMalley et al.(2016)
bZIP42_colamp_a 		0.797 0.677
For this family, TFs with SR scores > 0.782 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla008074 bZIP 60 121

Links

Other bZIP family TFs
Other Citrullus lanatus TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_07483 Aegilops tauschii F775_07483 I 0.000
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I 0.000
AMTR_s00021p00218190 Amborella trichopoda AMTR_s00021p00218190 N 0.000
Aquca_015_00350 Aquilegia coerulea Aquca_015_00350 N 0.000
fgenesh1_pg.C_scaffold_2001738 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2001738 I 0.000
fgenesh2_kg.7__520__AT4G35590.1 Arabidopsis lyrata fgenesh2_kg.7__520__AT4G35590.1 N 0.000
RKD5 Arabidopsis thaliana AT4G35590 N 0.000
Bo1g006340 Brassica oleracea Bo1g006340 N 0.000
Bra011626 Brassica rapa Bra011626 N 0.000
Cagra.0402s0077 Capsella grandiflora Cagra.0402s0077 I 0.000
Cagra.2350s0102 Capsella grandiflora Cagra.2350s0102 N 0.000
Carubv10005148m.g Capsella rubella Carubv10005148m.g N 0.000
Carubv10021541m.g Capsella rubella Carubv10021541m.g I 0.000
Cla019404 Citrullus lanatus Cla019404 I 0.000
Ciclev10027531m.g Citrus clementina Ciclev10027531m.g N 0.000
orange1.1g039420m.g Citrus sinensis orange1.1g039420m.g N 0.000
Thhalv10019554m.g Eutrema salsugineum Thhalv10019554m.g I 0.000
Thhalv10027037m.g Eutrema salsugineum Thhalv10027037m.g N 0.000
gene26015-v1.0-hybrid Fragaria vesca gene26015-v1.0-hybrid I 0.000
gene13055-v1.0-hybrid Fragaria vesca gene13055-v1.0-hybrid N 0.000
GLYMA11G09080 Glycine max GLYMA11G09080 N 0.000
GLYMA01G36360 Glycine max GLYMA01G36360 N 0.000
Gorai.006G266900 Gossypium raimondii Gorai.006G266900 I 0.000
Gorai.003G002500 Gossypium raimondii Gorai.003G002500 N 0.000
MLOC_59560 Hordeum vulgare MLOC_59560 I 0.000
MLOC_12609 Hordeum vulgare MLOC_12609 I 0.000
Lus10034456.g Linum usitatissimum Lus10034456.g I 0.000
chr2.CM0272.20.nd Lotus japonicus chr2.CM0272.20.nd N 0.000
MDP0000125133 Malus domestica MDP0000125133 N 0.000
MDP0000192895 Malus domestica MDP0000192895 N 0.000
MDP0000215412 Malus domestica MDP0000215412 N 0.000
MDP0000261199 Malus domestica MDP0000261199 I 0.000
MDP0000291622 Malus domestica MDP0000291622 N 0.000
MDP0000266172 Malus domestica MDP0000266172 I 0.000
cassava26650.m1 Manihot esculenta cassava26650.m1 N 0.000
cassava35166.m1 Manihot esculenta cassava35166.m1 I 0.000
MTR_5g024070 Medicago truncatula MTR_5g024070 N 0.000
mg020279m Mimulus guttatus mg020279m I 0.000
GSMUA_Achr8G13370_001 Musa acuminata GSMUA_Achr8G13370_001 N 0.000
OBART01G19230 Oryza barthii OBART01G19230 N 0.000
OGLUM01G22860 Oryza glumaepatula OGLUM01G22860 N 0.000
BGIOSGA001434 Oryza indica BGIOSGA001434 N 0.000
ONIVA01G21910 Oryza nivara ONIVA01G21910 N 0.000
OPUNC01G19590 Oryza punctata OPUNC01G19590 N 0.000
ORUFI01G21630 Oryza rufipogon ORUFI01G21630 N 0.000
Pavir.Aa00708 Panicum virgatum Pavir.Aa00708 I 0.000
Pavir.Ab02992 Panicum virgatum Pavir.Ab02992 I 0.000
fgenesh1_pg.scaffold_823000001 Physcomitrella patens fgenesh1_pg.scaffold_823000001 N 0.000
Pm026816 Prunus mume Pm026816 N 0.000
Pm024905 Prunus mume Pm024905 I 0.000
PRUPE_ppa023107mg Prunus persica PRUPE_ppa023107mg I 0.000
PRUPE_ppa011563mg Prunus persica PRUPE_ppa011563mg N 0.000
29830.m001444 Ricinus communis 29830.m001444 N 0.000
SELMODRAFT_73108 Selaginella moellendorffii SELMODRAFT_73108 N 0.000
SELMODRAFT_408627 Selaginella moellendorffii SELMODRAFT_408627 N 0.000
SELMODRAFT_73113 Selaginella moellendorffii SELMODRAFT_73113 N 0.000
SELMODRAFT_73116 Selaginella moellendorffii SELMODRAFT_73116 N 0.000
SELMODRAFT_73117 Selaginella moellendorffii SELMODRAFT_73117 N 0.000
SELMODRAFT_73118 Selaginella moellendorffii SELMODRAFT_73118 N 0.000
SELMODRAFT_73278 Selaginella moellendorffii SELMODRAFT_73278 N 0.000
SELMODRAFT_73111 Selaginella moellendorffii SELMODRAFT_73111 N 0.000
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N 0.000
SELMODRAFT_73112 Selaginella moellendorffii SELMODRAFT_73112 N 0.000
Si020172m.g Setaria italica Si020172m.g I 0.000
Solyc03g083040.1 Solanum lycopersicum Solyc03g083040.1 N 0.000
PGSC0003DMG400018531 Solanum tuberosum PGSC0003DMG400018531 N 0.000
TCM_000070 Theobroma cacao TCM_000070 N 0.000
Traes_7DS_405F08A53 Triticum aestivum Traes_7DS_405F08A53 I 0.000
TRIUR3_19503 Triticum urartu TRIUR3_19503 I 0.000
VIT_17s0000g06250 Vitis vinifera VIT_17s0000g06250 I 0.000
GRMZM2G392306 Zea mays GRMZM2G392306 I 0.000