RO3G_05801 (Rhizopus oryzae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 RO3G_05801 T078175_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RO3G_05801
M01434_2.00		 Rhizopus oryzae
NNGATYNNCN
NGNNRATCNN		 PBM
Najafabadi et al.(2015a)
pTH10221		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01434_2.00 C2H2 ZF 51 73
M01434_2.00 C2H2 ZF 79 103

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_05800 C2H2 ZF 141 163
RO3T_05800 C2H2 ZF 169 193

Links

Other C2H2 ZF family TFs
Other Rhizopus oryzae TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgeneshMC_pg.C_10568 Mucor circinelloides estExt_fgeneshMC_pg.C_10568 I 0.763
estExt_Genewise1.C_80340 Mucor circinelloides estExt_Genewise1.C_80340 I 0.792
gw1.1.1257.1 Mucor circinelloides gw1.1.1257.1 I 0.769
gw1.5.921.1 Mucor circinelloides gw1.5.921.1 I 0.757
gw1.15.181.1 Phycomyces blakesleeanus gw1.15.181.1 I 0.816
gw1.23.155.1 Phycomyces blakesleeanus gw1.23.155.1 I 0.792
gw1.25.121.1 Phycomyces blakesleeanus gw1.25.121.1 I 0.763
gw1.3.584.1 Phycomyces blakesleeanus gw1.3.584.1 I 0.782
gw1.73.24.1 Phycomyces blakesleeanus gw1.73.24.1 I 0.768
GLOINDRAFT_221110 Rhizophagus irregularis GLOINDRAFT_221110 I 0.763
GLOINDRAFT_24118 Rhizophagus irregularis GLOINDRAFT_24118 I 0.763
GLOINDRAFT_58638 Rhizophagus irregularis GLOINDRAFT_58638 I 0.763
RO3G_01826 Rhizopus oryzae RO3G_01826 I 0.769
RO3G_13834 Rhizopus oryzae RO3G_13834 I 0.792