ZAT9 (Arabidopsis thaliana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 AT3G60580 T080864_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT9
M06817_2.00		 Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.827 0.935
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.802 0.870
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.799 0.739
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.776 0.717
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.776 0.717
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.776 0.717
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.775 0.717
AZF1
M01860_2.00 		Arabidopsis thaliana
NWSYDNN
NNHRSWN		 PBM
Weirauch et al.(2014)
pTH7163 		0.766 0.739
AZF1
M06826_2.00 		Arabidopsis thaliana
WCACTVWCWNH
DNWGWBAGTGW		 Dap-seq
OMalley et al.(2016)
AZF1_colamp_a 		0.766 0.739
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AT3G60580.1 C2H2 ZF 173 195
AT3G60580.1 C2H2 ZF 224 246

Links

Other C2H2 ZF family TFs
Other Arabidopsis thaliana TFs

228 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_18608 Aegilops tauschii F775_18608 I
F775_17661 Aegilops tauschii F775_17661 I
fgenesh2_kg.5__981__AT3G46090.1 Arabidopsis lyrata fgenesh2_kg.5__981__AT3G46090.1 I
ZAT7 Arabidopsis thaliana AT3G46090 D
ZAT8 Arabidopsis thaliana AT3G46080 I
Bostr.26833s0254 Boechera stricta Bostr.26833s0254 I
BRADI1G03770 Brachypodium distachyon BRADI1G03770 I
BRADI1G03780 Brachypodium distachyon BRADI1G03780 I
BRADI1G03790 Brachypodium distachyon BRADI1G03790 I
BRADI2G23160 Brachypodium distachyon BRADI2G23160 I
BRADI2G54500 Brachypodium distachyon BRADI2G54500 I
Bo9g140820 Brassica oleracea Bo9g140820 I
Bo2g025350 Brassica oleracea Bo2g025350 I
Bo3g017740 Brassica oleracea Bo3g017740 I
Bra006691 Brassica rapa Bra006691 I
Bra020284 Brassica rapa Bra020284 I
Bra006692 Brassica rapa Bra006692 I
Cagra.7309s0001 Capsella grandiflora Cagra.7309s0001 I
Cagra.1317s0034 Capsella grandiflora Cagra.1317s0034 I
Carubv10018142m.g Capsella rubella Carubv10018142m.g I
Eucgr.B02398 Eucalyptus grandis Eucgr.B02398 I
Eucgr.A01232 Eucalyptus grandis Eucgr.A01232 I 0.774
Thhalv10014884m.g Eutrema salsugineum Thhalv10014884m.g I
GLYMA15G04570 Glycine max GLYMA15G04570 I
GLYMA13G40860 Glycine max GLYMA13G40860 I
GLYMA11G15140 Glycine max GLYMA11G15140 I
Gorai.010G202400 Gossypium raimondii Gorai.010G202400 I 0.774
MLOC_67028 Hordeum vulgare MLOC_67028 I
MLOC_63032 Hordeum vulgare MLOC_63032 I
MLOC_14920 Hordeum vulgare MLOC_14920 I
LPERR01G31500 Leersia perrieri LPERR01G31500 I
LPERR03G33240 Leersia perrieri LPERR03G33240 I
MTR_2g096540 Medicago truncatula MTR_2g096540 I 0.756
GSMUA_Achr1G06720_001 Musa acuminata GSMUA_Achr1G06720_001 I
GSMUA_Achr11G21920_001 Musa acuminata GSMUA_Achr11G21920_001 I
GSMUA_Achr11G02250_001 Musa acuminata GSMUA_Achr11G02250_001 I
GSMUA_Achr10G13530_001 Musa acuminata GSMUA_Achr10G13530_001 I
GSMUA_Achr10G06730_001 Musa acuminata GSMUA_Achr10G06730_001 I
OBART03G39050 Oryza barthii OBART03G39050 I
OBART05G19310 Oryza barthii OBART05G19310 I
OB03G46010 Oryza brachyantha OB03G46010 I
ORGLA05G0167500 Oryza glaberrima ORGLA05G0167500 I
ORGLA03G0358200 Oryza glaberrima ORGLA03G0358200 I
ORGLA01G0304700 Oryza glaberrima ORGLA01G0304700 I
OGLUM01G40530 Oryza glumaepatula OGLUM01G40530 I
OGLUM03G38910 Oryza glumaepatula OGLUM03G38910 I
OGLUM05G20400 Oryza glumaepatula OGLUM05G20400 I
BGIOSGA004768 Oryza indica BGIOSGA004768 I
BGIOSGA013832 Oryza indica BGIOSGA013832 I
OMERI01G33710 Oryza meridionalis OMERI01G33710 I
OMERI03G35880 Oryza meridionalis OMERI03G35880 I
OMERI05G16850 Oryza meridionalis OMERI05G16850 I
ONIVA05G20190 Oryza nivara ONIVA05G20190 I
ONIVA03G40720 Oryza nivara ONIVA03G40720 I
ONIVA01G41740 Oryza nivara ONIVA01G41740 I
OPUNC01G35470 Oryza punctata OPUNC01G35470 I
OPUNC05G16930 Oryza punctata OPUNC05G16930 I
OPUNC01G35440 Oryza punctata OPUNC01G35440 I
ORUFI05G20520 Oryza rufipogon ORUFI05G20520 I
OS01G0839100 Oryza sativa OS01G0839100 I
OS03G0820400 Oryza sativa OS03G0820400 I
OS05G0460900 Oryza sativa OS05G0460900 I
Pavir.Ia00294 Panicum virgatum Pavir.Ia00294 I
Pavir.J14338 Panicum virgatum Pavir.J14338 I
Pavir.Eb03660 Panicum virgatum Pavir.Eb03660 I
Pavir.Ia00291 Panicum virgatum Pavir.Ia00291 I
Pavir.Ib04509 Panicum virgatum Pavir.Ib04509 I
Pavir.J00893 Panicum virgatum Pavir.J00893 I
Pavir.J04850 Panicum virgatum Pavir.J04850 I
Si008395m.g Setaria italica Si008395m.g I
Si037251m.g Setaria italica Si037251m.g I
Si037672m.g Setaria italica Si037672m.g I
Si003051m.g Setaria italica Si003051m.g I
Solyc06g075780.1 Solanum lycopersicum Solyc06g075780.1 I
Solyc11g073060.1 Solanum lycopersicum Solyc11g073060.1 I
PGSC0003DMG401030312 Solanum tuberosum PGSC0003DMG401030312 I
PGSC0003DMG400008327 Solanum tuberosum PGSC0003DMG400008327 I 0.759
Sb01g003280 Sorghum bicolor Sb01g003280 I
Sb03g039270 Sorghum bicolor Sb03g039270 I
Sb10g031270 Sorghum bicolor Sb10g031270 I
Traes_5DL_50E35B4F3 Triticum aestivum Traes_5DL_50E35B4F3 I
TRAES3BF127400030CFD_g Triticum aestivum TRAES3BF127400030CFD_g I
Traes_5BL_3B50B6963 Triticum aestivum Traes_5BL_3B50B6963 I
Traes_5BL_56E52A2FC Triticum aestivum Traes_5BL_56E52A2FC N
Traes_5BL_8DB8274DB1 Triticum aestivum Traes_5BL_8DB8274DB1 I
Traes_5BL_B038BE0A3 Triticum aestivum Traes_5BL_B038BE0A3 I
Traes_5BL_BB99746DD Triticum aestivum Traes_5BL_BB99746DD I
Traes_5DL_F269EF70D Triticum aestivum Traes_5DL_F269EF70D I
Traes_5DL_9D713AD9C Triticum aestivum Traes_5DL_9D713AD9C I
Traes_5DL_4B4927090 Triticum aestivum Traes_5DL_4B4927090 I
TRIUR3_15911 Triticum urartu TRIUR3_15911 I
TRIUR3_12166 Triticum urartu TRIUR3_12166 I
TRIUR3_01057 Triticum urartu TRIUR3_01057 N
GRMZM2G002805 Zea mays GRMZM2G002805 I
GRMZM2G002815 Zea mays GRMZM2G002815 I
GRMZM2G061626 Zea mays GRMZM2G061626 I
GRMZM2G376061 Zea mays GRMZM2G376061 I
GRMZM2G112799 Zea mays GRMZM2G112799 I