CJA01054 (Caenorhabditis japonica)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CJA01054 T083729_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-3
M00640_2.00 		Caenorhabditis elegans
DGTGTGTR
YACACACH		 PBM
Narasimhan et al.(2015)
pTH10629 		0.772 0.867
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CJA01054 C2H2 ZF 162 184
CJA01054 C2H2 ZF 190 211

Links

Other C2H2 ZF family TFs
Other Caenorhabditis japonica TFs

3 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LBD2 Arabidopsis lyrata scaffold_100624.1 I
Bostr.25219s0329 Boechera stricta Bostr.25219s0329 I
Bo8g006050 Brassica oleracea Bo8g006050 I
Bo8g114670 Brassica oleracea Bo8g114670 I
Bra030647 Brassica rapa Bra030647 I
Bra032430 Brassica rapa Bra032430 I
Cagra.1671s0259 Capsella grandiflora Cagra.1671s0259 I
Carubv10011711m.g Capsella rubella Carubv10011711m.g I
Thhalv10008796m.g Eutrema salsugineum Thhalv10008796m.g I