CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CSUB01_08590
(
Colletotrichum sublineola
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
CSUB01_08590
T085134_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06487
M01197_2.00
Neurospora crassa
NBMGCCKCNN
NNGMGGCKVN
PBM
Lambert et al.(2019)
pTH10205
0.820
0.942
NCU06487
M01887_2.00
Neurospora crassa
NBAGCCKCRH
DYGMGGCTVN
PBM
Weirauch et al.(2014)
pTH8951
0.820
0.942
XP_001540939.1
M01188_2.00
Histoplasma capsulatum
NBAGCCKCNN
NNGMGGCTVN
PBM
Lambert et al.(2019)
pTH11147
0.787
0.855
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KDN60740
C2H2 ZF
381
406
YVCTFSGCNAAPFQTQYLLNSHANVH
KDN60740
C2H2 ZF
412
441
HYCSVKGCPRSEGGKGFKRKNEMIRHGLVH
KDN60740
C2H2 ZF
446
472
YVCPFCPDREHKYPRPDNLQRHVRVHH
Links
Other
C2H2 ZF
family TFs
Other
Colletotrichum sublineola
TFs
91 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VNI1
Arabidopsis lyrata
fgenesh2_kg.6__879__AT5G09330.2
N
NAC082
Arabidopsis thaliana
AT5G09330
N
Bostr.13129s0062
Boechera stricta
Bostr.13129s0062
N
Bo2g009300
Brassica oleracea
Bo2g009300
I
Bo3g005150
Brassica oleracea
Bo3g005150
N
Bo9g174090
Brassica oleracea
Bo9g174090
N
Bra009379
Brassica rapa
Bra009379
N
Bra028640
Brassica rapa
Bra028640
I
Cagra.1365s0106
Capsella grandiflora
Cagra.1365s0106
N
Carubv10001139m.g
Capsella rubella
Carubv10001139m.g
N
Thhalv10013785m.g
Eutrema salsugineum
Thhalv10013785m.g
N