ZNF454 (Bos taurus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSBTAG00000004262 T087755_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF454
M04571_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_1 		0.827 0.989
ZNF454
M04572_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_HT-SELEX_2 		0.827 0.989
ZNF454
M08346_2.00 		Homo sapiens
KVVRNCHNYMRGGGCCNDGDGCCWTTB
VAAWGGCHCHNGGCCCYKRNDGNYBBM		 ChIP-seq
Schmitges et al.(2016)
Q8N9F8_4-12.RCADE 		0.827 0.989
ZNF454
M08256_2.00 		Homo sapiens
GWGCYTT
AARGCWC		 ChIP-seq
Najafabadi et al.(2015b)
ZNF454 		0.827 0.989
ZNF454
M07651_2.00 		Homo sapiens
CRKVVRHCCVYCRGGVCCBVGAGCCNKYB
VRMNGGCTCBVGGBCCYGRBRGDYBBMYG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF454.MEME.OriginalMapping 		0.827 0.989
ZNF454
M04573_2.00 		Homo sapiens
WRGCGCCWGGCGCYW
WRGCGCCWGGCGCYW		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_1 		0.827 0.989
ZNF454
M04574_2.00 		Homo sapiens
TRGCGCCGGCGCYN
NRGCGCCGGCGCYA		 SELEX
Yin et al.(2017)
ZNF454_eDBD_Methyl-HT-SELEX_2 		0.827 0.989
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSBTAP00000016859 C2H2 ZF 209 231
ENSBTAP00000016859 C2H2 ZF 248 270
ENSBTAP00000016859 C2H2 ZF 276 298
ENSBTAP00000016859 C2H2 ZF 304 326
ENSBTAP00000016859 C2H2 ZF 332 354
ENSBTAP00000016859 C2H2 ZF 360 382
ENSBTAP00000016859 C2H2 ZF 388 410
ENSBTAP00000016859 C2H2 ZF 416 438
ENSBTAP00000016859 C2H2 ZF 444 466
ENSBTAP00000016859 C2H2 ZF 472 494
ENSBTAP00000016859 C2H2 ZF 500 522
ENSBTAP00000016859 C2H2 ZF 528 550

Links

Other C2H2 ZF family TFs
Other Bos taurus TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
HpaG810857 Hyaloperonospora arabidopsidis HpaG810857 I 0.000
fgenesh1_kg.C_scaffold_15000102 Phytophthora capsici fgenesh1_kg.C_scaffold_15000102 I 0.000
estExt_Genewise1Plus.C_180162 Phytophthora capsici estExt_Genewise1Plus.C_180162 I 0.000
estExt_fgenesh1_kg.C_2050026 Phytophthora capsici estExt_fgenesh1_kg.C_2050026 I 0.000
PITG_18789 Phytophthora infestans PITG_18789 I 0.000
PITG_14400 Phytophthora infestans PITG_14400 I 0.000
PITG_11223 Phytophthora infestans PITG_11223 N 0.000
fgenesh_scip_prom.28083.1909 Phytophthora lateralis fgenesh_scip_prom.28083.1909 I 0.000
fgenesh_scip_prom.28083.5526 Phytophthora lateralis fgenesh_scip_prom.28083.5526 I 0.000
F443_08983 Phytophthora parasitica F443_08983 I 0.000
F443_05992 Phytophthora parasitica F443_05992 N 0.000
F443_19686 Phytophthora parasitica F443_19686 I 0.000
F443_20671 Phytophthora parasitica F443_20671 I 0.000
F443_20703 Phytophthora parasitica F443_20703 I 0.000
Phyra80938 Phytophthora ramorum Phyra80938 D 0.000
Phyra87784 Phytophthora ramorum Phyra87784 I 0.000
Phyra95260 Phytophthora ramorum Phyra95260 I 0.000
Physo133517 Phytophthora sojae Physo133517 N 0.000
Physo133514 Phytophthora sojae Physo133514 N 0.000
Physo132945 Phytophthora sojae Physo132945 I 0.000
Physo132941 Phytophthora sojae Physo132941 I 0.000
maker-pag1_scaffold_266-snap-gene-0.11 Pythium aphanidermatum maker-pag1_scaffold_266-snap-gene-0.11 I 0.000
maker-pag1_scaffold_154-snap-gene-0.26 Pythium aphanidermatum maker-pag1_scaffold_154-snap-gene-0.26 N 0.000
maker-pir_contig_435-fgenesh-gene-0.6 Pythium irregulare maker-pir_contig_435-fgenesh-gene-0.6 I 0.000
maker-pir_contig_548-fgenesh-gene-0.4 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.4 I 0.000
maker-pir_contig_548-fgenesh-gene-0.3 Pythium irregulare maker-pir_contig_548-fgenesh-gene-0.3 I 0.000
maker-piw_contig_637-fgenesh-gene-0.5 Pythium iwayamai maker-piw_contig_637-fgenesh-gene-0.5 I 0.000
maker-piw_contig_50-fgenesh-gene-0.1 Pythium iwayamai maker-piw_contig_50-fgenesh-gene-0.1 I 0.000
PYU1_G002826 Pythium ultimum PYU1_G002826 N 0.000
PYU1_G002831 Pythium ultimum PYU1_G002831 N 0.000
PYU1_G002832 Pythium ultimum PYU1_G002832 N 0.000
PYU1_G002833 Pythium ultimum PYU1_G002833 I 0.000
PYU1_G002835 Pythium ultimum PYU1_G002835 I 0.000
PYU1_G002849 Pythium ultimum PYU1_G002849 I 0.000
maker-pve_contig_734-snap-gene-0.9 Pythium vexans maker-pve_contig_734-snap-gene-0.9 I 0.000
maker-pve_contig_13-snap-gene-0.46 Pythium vexans maker-pve_contig_13-snap-gene-0.46 I 0.000