CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ZNF354A
(
Canis familiaris
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSCAFG00000031000
T088611_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF354A
M08331_2.00
Homo sapiens
RTTTARDCCATTTAY
RTAAATGGHYTAAAY
ChIP-seq
Schmitges et al.(2016)
O60765_5-9.RCADE
0.822
0.987
ZNF354A
M07622_2.00
Homo sapiens
RTTTARHCCATTTAC
GTAAATGGDYTAAAY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354A.RCADE.OriginalMapping
0.822
0.987
ZNF354A
M08914_2.00
Homo sapiens
DTTYHDNYCHTTTMYWTTTADTGW
WCAHTAAAWRKAAADGRNHDRAAH
Misc
Kulakovskiy et al.(2013)
Z354A_HUMAN.H11MO.0.C
0.822
0.987
ZNF354B
M07653_2.00
Homo sapiens
RDWTAKYYCMTT
AAKGRRMTAWHY
ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF354B.RCADE.ReprocessedData
0.775
0.923
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCAFP00000038594
C2H2 ZF
215
237
YKCSICEKTFINTSSLRKHEKNH
ENSCAFP00000038594
C2H2 ZF
243
265
FKCKECSKAFNQSSALIQHQITH
ENSCAFP00000038594
C2H2 ZF
271
293
YVCKECGKAFTLSTSLYKHLRTH
ENSCAFP00000038594
C2H2 ZF
299
321
YRCKECGKSFSRRSGLFIHQKIH
ENSCAFP00000038594
C2H2 ZF
353
375
YLCNECGNTFKSSSSLRYHQRIH
ENSCAFP00000038594
C2H2 ZF
381
403
FKCSECGRAFSQSASLIQHERIH
ENSCAFP00000038594
C2H2 ZF
409
431
YRCNECGKGFTSISRLNRHRIIH
ENSCAFP00000038594
C2H2 ZF
437
459
YNCNECGKALSSHSTLIIHERIH
ENSCAFP00000038594
C2H2 ZF
465
487
CKCKVCGKAFRQSSALIQHQRMH
ENSCAFP00000038594
C2H2 ZF
493
515
YKCNECGKTFRCNSSLSNHQRIH
ENSCAFP00000038594
C2H2 ZF
521
543
YRCEECGISFGQSSALIQHRRIH
ENSCAFP00000038594
C2H2 ZF
549
571
FKCNTCGKTFRQSSSRIAHQRIH
ENSCAFP00000038594
C2H2 ZF
577
599
YECTTCGKLFNHRSSLTNHYKIH
Links
Other
C2H2 ZF
family TFs
Other
Canis familiaris
TFs
50 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_008_00101
Aquilegia coerulea
Aquca_008_00101
N
0.000
Aquca_025_00175
Aquilegia coerulea
Aquca_025_00175
N
0.000
FRS11
Arabidopsis thaliana
AT1G10240
N
0.000
BRADI5G11330
Brachypodium distachyon
BRADI5G11330
N
0.000
PK12746.1
Cannabis sativa
PK12746.1
N
0.000
PK06148.1
Cannabis sativa
PK06148.1
N
0.000
evm.TU.supercontig_151.57
Carica papaya
evm.TU.supercontig_151.57
N
0.000
Ciclev10000456m.g
Citrus clementina
Ciclev10000456m.g
N
0.000
Ciclev10004395m.g
Citrus clementina
Ciclev10004395m.g
N
0.000
orange1.1g047253m.g
Citrus sinensis
orange1.1g047253m.g
N
0.000
orange1.1g004420m.g
Citrus sinensis
orange1.1g004420m.g
N
0.000
Cucsa.019230
Cucumis sativus
Cucsa.019230
N
0.000
Eucgr.G00085
Eucalyptus grandis
Eucgr.G00085
N
0.000
Eucgr.K03522
Eucalyptus grandis
Eucgr.K03522
N
0.000
gene29088-v1.0-hybrid
Fragaria vesca
gene29088-v1.0-hybrid
N
0.000
gene05172-v1.0-hybrid
Fragaria vesca
gene05172-v1.0-hybrid
N
0.000
GLYMA10G00380
Glycine max
GLYMA10G00380
N
0.000
GLYMA09G04394
Glycine max
GLYMA09G04394
N
0.000
GLYMA15G15450
Glycine max
GLYMA15G15450
N
0.000
Gorai.011G195800
Gossypium raimondii
Gorai.011G195800
N
0.000
MLOC_15705
Hordeum vulgare
MLOC_15705
N
0.000
MDP0000233216
Malus domestica
MDP0000233216
N
0.000
MDP0000234814
Malus domestica
MDP0000234814
N
0.000
MDP0000786741
Malus domestica
MDP0000786741
N
0.000
cassava25471.m1
Manihot esculenta
cassava25471.m1
N
0.000
PDK_20s1756181g001
Phoenix dactylifera
PDK_20s1756181g001
N
0.000
PDK_20s1722071g001
Phoenix dactylifera
PDK_20s1722071g001
N
0.000
PDK_20s1635961g004
Phoenix dactylifera
PDK_20s1635961g004
N
0.000
POPTR_0002s20030
Populus trichocarpa
POPTR_0002s20030
N
0.000
POPTR_0004s23620
Populus trichocarpa
POPTR_0004s23620
N
0.000
POPTR_0008s10810
Populus trichocarpa
POPTR_0008s10810
N
0.000
Pm008290
Prunus mume
Pm008290
N
0.000
Pm003854
Prunus mume
Pm003854
N
0.000
PRUPE_ppa002003mg
Prunus persica
PRUPE_ppa002003mg
N
0.000
PRUPE_ppa002379mg
Prunus persica
PRUPE_ppa002379mg
N
0.000
29685.m000503
Ricinus communis
29685.m000503
N
0.000
29889.m003255
Ricinus communis
29889.m003255
N
0.000
SapurV1A.0060s0220
Salix purpurea
SapurV1A.0060s0220
N
0.000
SapurV1A.0158s0480
Salix purpurea
SapurV1A.0158s0480
N
0.000
SapurV1A.0225s0240
Salix purpurea
SapurV1A.0225s0240
N
0.000
Solyc09g075640.2
Solanum lycopersicum
Solyc09g075640.2
N
0.000
Solyc01g103180.2
Solanum lycopersicum
Solyc01g103180.2
N
0.000
TCM_021310
Theobroma cacao
TCM_021310
N
0.000
TCM_041141
Theobroma cacao
TCM_041141
N
0.000
Traes_2AL_9A4A7514E
Triticum aestivum
Traes_2AL_9A4A7514E
N
0.000
Traes_2BL_C1DE13045
Triticum aestivum
Traes_2BL_C1DE13045
N
0.000
TRIUR3_11057
Triticum urartu
TRIUR3_11057
N
0.000
VIT_05s0077g01400
Vitis vinifera
VIT_05s0077g01400
N
0.000
VIT_07s0005g01120
Vitis vinifera
VIT_07s0005g01120
N
0.000
VIT_12s0035g01360
Vitis vinifera
VIT_12s0035g01360
N
0.000