ZNF10 (Choloepus hoffmanni)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCHOG00000002413 T088763_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF10
M07774_2.00 		Homo sapiens
CCCTACCTC
GAGGTAGGG		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF10.RCADE.OriginalMapping 		0.801 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000002137 C2H2 ZF 262 284
ENSCHOP00000002137 C2H2 ZF 290 312
ENSCHOP00000002137 C2H2 ZF 318 340
ENSCHOP00000002137 C2H2 ZF 346 368
ENSCHOP00000002137 C2H2 ZF 374 396
ENSCHOP00000002137 C2H2 ZF 402 424
ENSCHOP00000002137 C2H2 ZF 430 452
ENSCHOP00000002137 C2H2 ZF 458 480
ENSCHOP00000002137 C2H2 ZF 486 508
ENSCHOP00000002137 C2H2 ZF 514 536

Links

Other C2H2 ZF family TFs
Other Choloepus hoffmanni TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_42755 Aegilops tauschii F775_42755 N
PK21717.1 Cannabis sativa PK21717.1 N
Cagra.0876s0043 Capsella grandiflora Cagra.0876s0043 N
Cagra.5789s0001 Capsella grandiflora Cagra.5789s0001 N
Ca_10215 Cicer arietinum Ca_10215 N
Eucgr.B03766 Eucalyptus grandis Eucgr.B03766 N
Gorai.008G086400 Gossypium raimondii Gorai.008G086400 I
MLOC_39554 Hordeum vulgare MLOC_39554 I
LjSGA_057038.1 Lotus japonicus LjSGA_057038.1 N
LjSGA_034303.1 Lotus japonicus LjSGA_034303.1 N
LjSGA_014958.1 Lotus japonicus LjSGA_014958.1 N
CM0385.220.nd Lotus japonicus CM0385.220.nd N
chr1.CM0600.120.nd Lotus japonicus chr1.CM0600.120.nd N
LjSGA_057664.1 Lotus japonicus LjSGA_057664.1 N
cassava15703.m1 Manihot esculenta cassava15703.m1 N
cassava45648.m1 Manihot esculenta cassava45648.m1 N
MTR_1g087540 Medicago truncatula MTR_1g087540 N
mgf023771m Mimulus guttatus mgf023771m N
mgf018056m Mimulus guttatus mgf018056m N
OB06G28240 Oryza brachyantha OB06G28240 N
ORGLA02G0219000 Oryza glaberrima ORGLA02G0219000 N
Pavir.Db00878 Panicum virgatum Pavir.Db00878 N
Pavir.Eb02286 Panicum virgatum Pavir.Eb02286 N
Pavir.J14839 Panicum virgatum Pavir.J14839 N
Pavir.J25377 Panicum virgatum Pavir.J25377 N
PDK_20s1922781g001 Phoenix dactylifera PDK_20s1922781g001 N
POPTR_0017s10780 Populus trichocarpa POPTR_0017s10780 N
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I
Pm000007 Prunus mume Pm000007 N
TCM_041010 Theobroma cacao TCM_041010 I
Traes_7DS_76515C538 Triticum aestivum Traes_7DS_76515C538 N
Traes_7AS_FD974A17F Triticum aestivum Traes_7AS_FD974A17F N
Traes_7AS_ADDEF000C Triticum aestivum Traes_7AS_ADDEF000C N