ZNF140 (Callithrix jacchus)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSCJAG00000013104 T089474_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF140
M04621_2.00 		Homo sapiens
DRCAATTCCGCTCN
NGAGCGGAATTGYH		 SELEX
Yin et al.(2017)
ZNF140_eDBD_HT-SELEX 		0.819 0.974
ZNF140
M08372_2.00 		Homo sapiens
CAATTCYGCYCHNNNNNNNNNNNB
VNNNNNNNNNNNDGRGCRGAATTG		 ChIP-seq
Schmitges et al.(2016)
P52738_3-10.RCADE 		0.819 0.974
ZNF140
M08945_2.00 		Homo sapiens
NNNDNYBYWGCAATTCYRCTCCHN
NDGGAGYRGAATTGCWRVRNHNNN		 Misc
Kulakovskiy et al.(2013)
ZN140_HUMAN.H11MO.0.C 		0.819 0.974
ZNF140
M04622_2.00 		Homo sapiens
NRCAATTCCGCTCV
BGAGCGGAATTGYN		 SELEX
Yin et al.(2017)
ZNF140_eDBD_Methyl-HT-SELEX 		0.819 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCJAP00000024056 C2H2 ZF 161 183
ENSCJAP00000024056 C2H2 ZF 189 211
ENSCJAP00000024056 C2H2 ZF 217 239
ENSCJAP00000024056 C2H2 ZF 245 267
ENSCJAP00000024056 C2H2 ZF 273 295
ENSCJAP00000024056 C2H2 ZF 301 323
ENSCJAP00000024056 C2H2 ZF 329 351
ENSCJAP00000024056 C2H2 ZF 357 379
ENSCJAP00000024056 C2H2 ZF 385 407
ENSCJAP00000024056 C2H2 ZF 413 435
ENSCJAP00000024069 C2H2 ZF 58 80
ENSCJAP00000024069 C2H2 ZF 86 108
ENSCJAP00000024069 C2H2 ZF 114 136
ENSCJAP00000024069 C2H2 ZF 142 164
ENSCJAP00000024069 C2H2 ZF 170 192
ENSCJAP00000024069 C2H2 ZF 198 220
ENSCJAP00000024069 C2H2 ZF 226 248
ENSCJAP00000024069 C2H2 ZF 254 276
ENSCJAP00000024069 C2H2 ZF 282 304
ENSCJAP00000024069 C2H2 ZF 310 332

Links

Other C2H2 ZF family TFs
Other Callithrix jacchus TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG014229.1 Alligator sinensis Alligator_sinensis_CCG014229.1 I 0.000
ENSAPLG00000002715 Anas platyrhynchos ENSAPLG00000002715 I 0.000
HIF1A Anolis carolinensis ENSACAG00000016205 I 0.000
Afo_R010338 Aptenodytes forsteri Afo_R010338 I 0.000
ENSAMXG00000019342 Astyanax mexicanus ENSAMXG00000019342 I 0.000
e_gw.35.42.1 Branchiostoma floridae e_gw.35.42.1 I 0.000
e_gw.35.150.1 Branchiostoma floridae e_gw.35.150.1 I 0.000
Brh_R012268 Buceros rhinoceros Brh_R012268 I 0.000
Aan_R001655 Calypte anna Aan_R001655 I 0.000
Cmyd_10008490 Chelonia mydas Cmyd_10008490 I 0.000
ENSFALG00000003396 Ficedula albicollis ENSFALG00000003396 I 0.000
HIF1A Gallus gallus ENSGALG00000011870 I 0.000
Gfo_R006824 Geospiza fortis Gfo_R006824 I 0.000
ENSLOCG00000010146 Lepisosteus oculatus ENSLOCG00000010146 I 0.000
HIF1A Meleagris gallopavo ENSMGAG00000013552 I 0.000
HIF1A Monodelphis domestica ENSMODG00000008760 I 0.000
Hif1a Mus musculus ENSMUSG00000021109 D 0.000
Ogr06281 Ophisaurus gracilis Ogr06281 I 0.000
ENSORLG00000015698 Oryzias latipes ENSORLG00000015698 I 0.000
ENSPSIG00000010467 Pelodiscus sinensis ENSPSIG00000010467 I 0.000
ENSSHAG00000012129 Sarcophilus harrisii ENSSHAG00000012129 I 0.000
HIF1A Taeniopygia guttata ENSTGUG00000012978 I 0.000
ENSTNIG00000019821 Tetraodon nigroviridis ENSTNIG00000019821 I 0.000
Tal_R011146 Tyto alba Tal_R011146 I 0.000
AAI26006 Xenopus laevis AAI26006 I 0.000
AAO72733 Xenopus laevis AAO72733 I 0.000
ABF71072 Xenopus laevis ABF71072 I 0.000
hif1a Xenopus tropicalis XB-GENE-946622 I 0.000