OVOL2 (Loxodonta africana)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSLAFG00000010597 T097335_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
OVOL2
M00235_2.00
Homo sapiens
NCCGYTANNN

NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_REF
0.825 0.989
OVOL2
M04445_2.00
Homo sapiens
NNHCCGYTANNHN

NDNNTARCGGDNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX
0.825 0.989
OVOL2
M04447_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX
0.825 0.989
OVOL2
M10207_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MOVOB_01
0.825 0.989
OVOL2
M04446_2.00
Homo sapiens
NNWCCGTTANNHN

NDNNTAACGGWNN
SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX
0.825 0.989
OVOL2
M04448_2.00
Homo sapiens
DDWCCGTTABNHN

NDNVTAACGGWHH
SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX
0.825 0.989
Ovol2
M08993_2.00
Mus musculus
HCCGTTAN

NTAACGGD
Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C
0.813 0.967
OVOL2
M00234_2.00
Homo sapiens
NCCGYTANNN

NNNTARCGGN
PBM
Barrera et al.(2016)
OVOL2_D228E
0.770 0.978
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLAFP00000008874 C2H2 ZF 105 127
ENSLAFP00000008874 C2H2 ZF 133 155
ENSLAFP00000008874 C2H2 ZF 161 184
ENSLAFP00000008874 C2H2 ZF 200 223
ENSLAFP00000023127 C2H2 ZF 119 141
ENSLAFP00000023127 C2H2 ZF 147 169
ENSLAFP00000023127 C2H2 ZF 175 198
ENSLAFP00000023127 C2H2 ZF 214 237

Links

Other C2H2 ZF family TFs
Other Loxodonta africana TFs

55 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
F775_12975 Aegilops tauschii F775_12975 N 0.000
AMTR_s00006p00259200 Amborella trichopoda AMTR_s00006p00259200 I 0.000
BRADI3G02980 Brachypodium distachyon BRADI3G02980 N 0.000
MLOC_63436 Hordeum vulgare MLOC_63436 N 0.000
OBART02G02570 Oryza barthii OBART02G02570 N 0.000
ORGLA02G0024700 Oryza glaberrima ORGLA02G0024700 N 0.000
OGLUM02G02590 Oryza glumaepatula OGLUM02G02590 N 0.000
BGIOSGA007184 Oryza indica BGIOSGA007184 N 0.000
ONIVA02G02510 Oryza nivara ONIVA02G02510 N 0.000
OPUNC02G02000 Oryza punctata OPUNC02G02000 N 0.000
OS02G0132500 Oryza sativa OS02G0132500 N 0.000
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I 0.000
Sb04g002700 Sorghum bicolor Sb04g002700 N 0.000
Traes_6AS_FDF16F4EA Triticum aestivum Traes_6AS_FDF16F4EA N 0.000
GRMZM2G361611 Zea mays GRMZM2G361611 N 0.000
GRMZM2G444748 Zea mays GRMZM2G444748 N 0.000