ZNF18 (Otolemur garnettii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSOGAG00000027830 T103701_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZNF18
M08316_2.00 		Homo sapiens
NSNRTTCACACY
RGTGTGAAYNSN		 ChIP-seq
Schmitges et al.(2016)
P17022.MEME 		0.813 0.974
ZNF18
M07602_2.00 		Homo sapiens
RGTGTGARBNBNNNN
NNNNVNVYTCACACY		 ChIP-seq+ChIP-exo
Barazandeh et al.(2018)
ZNF18.ChIP-seq.ReprocessedData 		0.813 0.974
ZNF18
M08901_2.00 		Homo sapiens
NVDVTTCACACY
RGTGTGAABHBN		 Misc
Kulakovskiy et al.(2013)
ZNF18_HUMAN.H11MO.0.C 		0.813 0.974
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000020704 C2H2 ZF 409 430
ENSOGAP00000020704 C2H2 ZF 436 458
ENSOGAP00000020704 C2H2 ZF 464 486
ENSOGAP00000020704 C2H2 ZF 492 514
ENSOGAP00000020704 C2H2 ZF 520 542

Links

Other C2H2 ZF family TFs
Other Otolemur garnettii TFs

26 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PTRK_0001643700 Parastrongyloides trichosuri PTRK_0001643700 N
RSKR_0000826600 Rhabditophanes kr3021 RSKR_0000826600 N
SSTP_0000473100 Strongyloides stercoralis SSTP_0000473100 N
SVE_0118500 Strongyloides venezuelensis SVE_0118500 N