im:7142702 (Tetraodon nigroviridis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ENSTNIG00000009693 T112049_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BCL11B
M04453_2.00 		Homo sapiens
GTGAACGBNDNNVCTACAC
GTGTAGBNNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_HT-SELEX 		0.808 0.929
BCL11B
M04454_2.00 		Homo sapiens
GTGAACGBNDNHVCTACAC
GTGTAGBDNHNVCGTTCAC		 SELEX
Yin et al.(2017)
BCL11B_eDBD_Methyl-HT-SELEX 		0.808 0.929
BCL11A
M07926_2.00 		Homo sapiens
BTYTCASTTCCYYHH
DDRRGGAASTGARAV		 ChIP-seq
Gerstein et al.(2012)
GM12878_BCL11A_HudsonAlpha 		0.789 0.893
BCL11A
M08881_2.00 		Homo sapiens
BHBYCABTTCCYBHNYN
NRNDVRGGAAVTGRVDV		 Misc
Kulakovskiy et al.(2013)
BC11A_HUMAN.H11MO.0.A 		0.789 0.893
BCL11A
M10187_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$BCL11A_02 		0.789 0.893
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTNIP00000012574 C2H2 ZF 350 371
ENSTNIP00000012574 C2H2 ZF 377 399
ENSTNIP00000012574 C2H2 ZF 677 699
ENSTNIP00000012574 C2H2 ZF 705 726
ENSTNIP00000012574 C2H2 ZF 734 755

Links

Other C2H2 ZF family TFs
Other Tetraodon nigroviridis TFs

123 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015813 Ailuropoda melanoleuca ENSAMEG00000015813 I 0.789
Alligator_sinensis_CCG008166.1 Alligator sinensis Alligator_sinensis_CCG008166.1 I 0.789
ENSAPLG00000006283 Anas platyrhynchos ENSAPLG00000006283 I 0.808
ENSAPLG00000007735 Anas platyrhynchos ENSAPLG00000007735 I 0.789
ENSACAG00000013085 Anolis carolinensis ENSACAG00000013085 I 0.808
BCL11A Anolis carolinensis ENSACAG00000015159 I 0.789
Afo_R004626 Aptenodytes forsteri Afo_R004626 I 0.808
Afo_R011357 Aptenodytes forsteri Afo_R011357 I 0.789
ENSAMXG00000004597 Astyanax mexicanus ENSAMXG00000004597 I 0.789
ENSAMXG00000015839 Astyanax mexicanus ENSAMXG00000015839 I 0.808
ENSAMXG00000018130 Astyanax mexicanus ENSAMXG00000018130 I 0.812
ENSBTAP00000023987-D2 Bos grunniens ENSBTAP00000023987-D2 I 0.789
BCL11B Bos taurus ENSBTAG00000018019 I 0.808
BCL11B Callithrix jacchus ENSCJAG00000006713 I 0.808
BCL11A Callithrix jacchus ENSCJAG00000009226 I 0.789
Aan_R000616 Calypte anna Aan_R000616 I 0.808
Aan_R006276 Calypte anna Aan_R006276 I 0.789
BCL11B Canis familiaris ENSCAFG00000017809 I 0.808
BCL11A Cavia porcellus ENSCPOG00000007587 I 0.789
ENSCPOG00000009946 Cavia porcellus ENSCPOG00000009946 I 0.808
Cmyd_10008592 Chelonia mydas Cmyd_10008592 I 0.789
Cmyd_10012109 Chelonia mydas Cmyd_10012109 I 0.808
ENSCSAG00000010477 Chlorocebus sabaeus ENSCSAG00000010477 I 0.808
bcl11aa Danio rerio ENSDARG00000061352 I 0.801
bcl11ab Danio rerio ENSDARG00000063153 I 0.801
im:7142702 Danio rerio ENSDARG00000067727 I 0.812
BCL11B Dasypus novemcinctus ENSDNOG00000012677 I 0.808
BCL11A Dasypus novemcinctus ENSDNOG00000019842 I 0.789
Bcl11a Dipodomys ordii ENSDORG00000010064 I 0.789
BCL11A Erinaceus europaeus ENSEEUG00000010958 I 0.789
BCL11A Felis catus ENSFCAG00000027154 I 0.789
ENSFALG00000011123 Ficedula albicollis ENSFALG00000011123 I 0.789
ENSGMOG00000012414 Gadus morhua ENSGMOG00000012414 I 0.800
ENSGMOG00000015842 Gadus morhua ENSGMOG00000015842 I 0.801
ENSGALG00000007866 Gallus gallus ENSGALG00000007866 I 0.789
ENSGALG00000011127 Gallus gallus ENSGALG00000011127 I 0.808
ENSGALG00000028278 Gallus gallus ENSGALG00000028278 I 0.808
im:7142702 Gasterosteus aculeatus ENSGACG00000005537 I 0.812
bcl11ba Gasterosteus aculeatus ENSGACG00000013118 I 0.800
bcl11aa Gasterosteus aculeatus ENSGACG00000013419 I 0.789
bcl11ab Gasterosteus aculeatus ENSGACG00000019222 I 0.799
Gfo_R006733 Geospiza fortis Gfo_R006733 I 0.808
Gfo_R008167 Geospiza fortis Gfo_R008167 I 0.789
BCL11B Gorilla gorilla ENSGGOG00000001232 I 0.808
BCL11A Gorilla gorilla ENSGGOG00000007337 I 0.789
HHAL008065-PA Halyomorpha halys HHAL008065-PA I 0.760
BCL11A Homo sapiens ENSG00000119866 D 0.789
BCL11B Homo sapiens ENSG00000127152 D 0.808
ENSSTOG00000004523 Ictidomys tridecemlineatus ENSSTOG00000004523 I 0.789
ENSSTOG00000021531 Ictidomys tridecemlineatus ENSSTOG00000021531 I 0.808
ISCW016418 Ixodes scapularis ISCW016418 I 0.775
ENSLACG00000003560 Latimeria chalumnae ENSLACG00000003560 I 0.791
ENSLOCG00000008679 Lepisosteus oculatus ENSLOCG00000008679 I 0.803
ENSLOCG00000016135 Lepisosteus oculatus ENSLOCG00000016135 I 0.799
LotgiG139415 Lottia gigantea LotgiG139415 I 0.760
BCL11A Loxodonta africana ENSLAFG00000003101 I 0.789
BCL11B Loxodonta africana ENSLAFG00000009254 I 0.808
ENSP00000338774 Macaca fascicularis ENSP00000338774 I 0.789
ENSP00000349723 Macaca fascicularis ENSP00000349723 I 0.804
BCL11B Macaca mulatta ENSMMUG00000003261 I 0.808
ENSMMUG00000011303 Macaca mulatta ENSMMUG00000011303 I 0.789
ENSMEUG00000001829 Macropus eugenii ENSMEUG00000001829 I 0.789
BCL11A Meleagris gallopavo ENSMGAG00000013042 I 0.789
BCL11A Microcebus murinus ENSMICG00000015052 I 0.789
BCL11B Monodelphis domestica ENSMODG00000012964 I 0.808
Bcl11a Mus musculus ENSMUSG00000000861 I 0.789
Bcl11b Mus musculus ENSMUSG00000048251 I 0.808
ENSNLEG00000000711 Nomascus leucogenys ENSNLEG00000000711 I 0.808
Ocbimv22018271m.g Octopus bimaculoides Ocbimv22018271m.g I 0.788
ENSONIG00000001067 Oreochromis niloticus ENSONIG00000001067 I 0.815
ENSONIG00000002906 Oreochromis niloticus ENSONIG00000002906 I 0.789
ENSONIG00000011060 Oreochromis niloticus ENSONIG00000011060 I 0.803
ENSONIG00000018855 Oreochromis niloticus ENSONIG00000018855 I 0.801
BCL11A Ornithorhynchus anatinus ENSOANG00000012402 I 0.791
BCL11B Ornithorhynchus anatinus ENSOANG00000014770 I 0.808
BCL11A Oryctolagus cuniculus ENSOCUG00000023948 I 0.789
ENSOCUG00000024296 Oryctolagus cuniculus ENSOCUG00000024296 I 0.792
bcl11aa Oryzias latipes ENSORLG00000001704 I 0.789
im:7142702 Oryzias latipes ENSORLG00000010488 I 0.810
bcl11ba Oryzias latipes ENSORLG00000010826 I 0.803
bcl11ab Oryzias latipes ENSORLG00000013169 I 0.801
BCL11B Otolemur garnettii ENSOGAG00000033204 I 0.808
BCL11B Pan troglodytes ENSPTRG00000006707 I 0.808
ENSPANG00000004313 Papio anubis ENSPANG00000004313 I 0.808
PHUM606430 Pediculus humanus PHUM606430 I 0.766
ENSPSIG00000013079 Pelodiscus sinensis ENSPSIG00000013079 I 0.808
ENSPSIG00000013644 Pelodiscus sinensis ENSPSIG00000013644 I 0.789
ENSPFOG00000003609 Poecilia formosa ENSPFOG00000003609 I 0.812
ENSPFOG00000007224 Poecilia formosa ENSPFOG00000007224 I 0.800
ENSPFOG00000007302 Poecilia formosa ENSPFOG00000007302 I 0.801
ENSPFOG00000019062 Poecilia formosa ENSPFOG00000019062 I 0.789
Pvit_09536 Pogona vitticeps Pvit_09536 I 0.808
Pvit_18645 Pogona vitticeps Pvit_18645 I 0.789
ENSPPYG00000006131 Pongo abelii ENSPPYG00000006131 I 0.808
BCL11A Pteropus vampyrus ENSPVAG00000000042 I 0.789
BCL11B Pteropus vampyrus ENSPVAG00000015516 I 0.808
Bcl11b Rattus norvegicus ENSRNOG00000005776 I 0.808
Bcl11a Rattus norvegicus ENSRNOG00000007049 I 0.789
RPRC001562 Rhodnius prolixus RPRC001562 I 0.761
Sakowv30026316m.g Saccoglossus kowalevskii Sakowv30026316m.g I 0.806
ENSSHAG00000009291 Sarcophilus harrisii ENSSHAG00000009291 I 0.808
ENSSHAG00000015804 Sarcophilus harrisii ENSSHAG00000015804 I 0.789
SMAR003355 Strigamia maritima SMAR003355 I 0.787
SPU_018909 Strongylocentrotus purpuratus SPU_018909 I 0.788
BCL11B Sus scrofa ENSSSCG00000002507 I 0.808
BCL11A Sus scrofa ENSSSCG00000008392 I 0.789
BCL11A Taeniopygia guttata ENSTGUG00000006790 I 0.789
BCL11B Taeniopygia guttata ENSTGUG00000012711 I 0.808
bcl11ba Takifugu rubripes ENSTRUG00000003531 I 0.803
bcl11aa Takifugu rubripes ENSTRUG00000003815 I 0.785
bcl11ab Takifugu rubripes ENSTRUG00000013751 I 0.801
im:7142702 Takifugu rubripes ENSTRUG00000018074 I 0.815
ENSTSYG00000009153 Tarsius syrichta ENSTSYG00000009153 I 0.789
bcl11ba Tetraodon nigroviridis ENSTNIG00000008283 I 0.803
bcl11ab Tetraodon nigroviridis ENSTNIG00000012076 I 0.801
BCL11A Tursiops truncatus ENSTTRG00000006191 I 0.789
BCL11B Tursiops truncatus ENSTTRG00000012140 I 0.803
BCL11A Vicugna pacos ENSVPAG00000000491 I 0.789
bcl11a Xenopus tropicalis XB-GENE-486641 I 0.789
ENSXMAG00000007242 Xiphophorus maculatus ENSXMAG00000007242 I 0.787
ENSXMAG00000019910 Xiphophorus maculatus ENSXMAG00000019910 I 0.812
ENSXMAG00000020344 Xiphophorus maculatus ENSXMAG00000020344 I 0.800
L798_02171 Zootermopsis nevadensis L798_02171 I 0.756