CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSTSYG00000003033
(
Tarsius syrichta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ENSTSYG00000003033
T112574_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ZNF554
M08341_2.00
Homo sapiens
CHGRGYCANNYRGDKDRCHNN
NNDGYHMHCYRNNTGRCYCDG
ChIP-seq
Schmitges et al.(2016)
Q86TJ5_1-7.RCADE
0.787
0.938
ZNF554
M08917_2.00
Homo sapiens
RCDGRGYCANNBRGDDDRCN
NGYHHHCYVNNTGRCYCHGY
Misc
Kulakovskiy et al.(2013)
ZN554_HUMAN.H11MO.0.C
0.787
0.938
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTSYP00000002741
C2H2 ZF
283
305
FECHQCGKVFNRRHSLSEHQRIH
ENSTSYP00000002741
C2H2 ZF
311
333
YGCQECGRAFTHNSTLTRHLRTH
ENSTSYP00000002741
C2H2 ZF
339
361
YTCSECGKAFNRISSLTQHQRIH
ENSTSYP00000002741
C2H2 ZF
367
389
YRCEDCGKSFCQSSYLILHKRTH
ENSTSYP00000002741
C2H2 ZF
395
417
YECSECGKAFSDRSSLNQHERTH
ENSTSYP00000002741
C2H2 ZF
423
445
YECHQCRRAFSQRSSLVRHERTH
ENSTSYP00000002741
C2H2 ZF
451
473
YGCTECGKTFSQSSSLVTHQKTH
Links
Other
C2H2 ZF
family TFs
Other
Tarsius syrichta
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin109873
Clonorchis sinensis
csin109873
N
ECANG7_00899
Echinococcus canadensis
ECANG7_00899
N
EmuJ_000811900
Echinococcus multilocularis
EmuJ_000811900
N
ECPE_0000451001
Echinostoma caproni
ECPE_0000451001
N
D915_08018
Fasciola hepatica
D915_08018
N
TTAC_0000736301
Hydatigera taeniaeformis
TTAC_0000736301
N
MCOS_0000531201
Mesocestoides corti
MCOS_0000531201
N
T265_13345
Opisthorchis viverrini
T265_13345
N
PXEA_0001645901
Protopolystoma xenopodis
PXEA_0001645901
N
A_01101
Schistosoma haematobium
A_01101
N
SMRZ_0001491901
Schistosoma margrebowiei
SMRZ_0001491901
N
SMTD_0002220201
Schistosoma mattheei
SMTD_0002220201
N
TRE_0000516501
Trichobilharzia regenti
TRE_0000516501
N