CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
SMTD_0002220201
(
Schistosoma mattheei
)
Pipsqueak
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF05225 (HTH_psq)
IPR007889
SMTD_0002220201
T315129_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SMTD_0002220201-mRNA-1
Pipsqueak
147
191
TQNELSEAVKAICFGQLGTRKAANLYGIPRSTLRNKICKLNELKK
Links
Other
Pipsqueak
family TFs
Other
Schistosoma mattheei
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A_01101
Schistosoma haematobium
A_01101
N
1.000
SMRZ_0001491901
Schistosoma margrebowiei
SMRZ_0001491901
N
1.000
Sjc_0043400
Schistosoma japonicum
Sjc_0043400
N
0.841
TRE_0000516501
Trichobilharzia regenti
TRE_0000516501
N
0.841
SROB_0001086401
Schistosoma rodhaini
SROB_0001086401
N
0.818
SPER_0002515801
Spirometra erinaceieuropaei
SPER_0002515801
N
0.793