GH13710 (Drosophila grimshawi)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0121186 T115306_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
bowl
M03676_2.00 		Drosophila melanogaster
GCGTAABACNRGKAGYN
NRCTMCYNGTVTTACGC		 SELEX
Nitta et al.(2015)
bowl_1 		0.827 1.000
bowl
M03677_2.00 		Drosophila melanogaster
NGCTACYGTRTTACGCN
NGCGTAAYACRGTAGCN		 SELEX
Nitta et al.(2015)
bowl_2 		0.827 1.000
bowl
M06090_2.00 		Drosophila melanogaster
RCTWCYGK
MCRGWAGY		 B1H
Zhu et al.(2011)
bowl_SANGER_5_FBgn0004893 		0.827 1.000
sob
M03674_2.00 		Drosophila melanogaster
RCTACYGNRTTACGCV
BGCGTAAYNCRGTAGY		 SELEX
Nitta et al.(2015)
sob_1 		0.814 0.957
sob
M03675_2.00 		Drosophila melanogaster
NGCGTAABNSNRGTAGY
RCTACYNSNVTTACGCN		 SELEX
Nitta et al.(2015)
sob_2 		0.814 0.957
sob
M06088_2.00 		Drosophila melanogaster
GCTWCTGBDNBDV
BHVNHVCAGWAGC		 B1H
Zhu et al.(2011)
sob_SANGER_10_FBgn0004892 		0.814 0.957
sob
M06089_2.00 		Drosophila melanogaster
BDGCTACYGKDBNN
NNVHMCRGTAGCHV		 B1H
Zhu et al.(2011)
sob_SOLEXA_5_FBgn0004892 		0.814 0.957
OSR2
M04521_2.00 		Homo sapiens
NGCTACYGBD
HVCRGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_HT-SELEX 		0.795 0.887
OSR2
M08324_2.00 		Homo sapiens
NBDGCTNCTGN
NCAGNAGCHVN		 ChIP-seq
Schmitges et al.(2016)
Q8N2R0.MEME 		0.795 0.887
OSR2
M08908_2.00 		Homo sapiens
NBHNYWGCTNCTSHDB
VHDSAGNAGCWRNDVN		 Misc
Kulakovskiy et al.(2013)
OSR2_HUMAN.H11MO.0.C 		0.795 0.887
OSR2
M04522_2.00 		Homo sapiens
NGCTACTGND
HNCAGTAGCN		 SELEX
Yin et al.(2017)
OSR2_eDBD_Methyl-HT-SELEX 		0.795 0.887
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0147616 C2H2 ZF 233 255
FBpp0147616 C2H2 ZF 261 283
FBpp0147616 C2H2 ZF 289 311
FBpp0147616 C2H2 ZF 317 339
FBpp0147616 C2H2 ZF 345 367

Links

Other C2H2 ZF family TFs
Other Drosophila grimshawi TFs

110 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01085 Acanthocheilonema viteae nAv.1.0.1.g01085 I
nAv.1.0.1.g09212 Acanthocheilonema viteae nAv.1.0.1.g09212 I
ANCCAN_13991 Ancylostoma caninum ANCCAN_13991 I
ANCDUO_19569 Ancylostoma duodenale ANCDUO_19569 I
ASIM_0001608201 Anisakis simplex ASIM_0001608201 I
ASIM_0000264301 Anisakis simplex ASIM_0000264301 I
ASIM_0000241101 Anisakis simplex ASIM_0000241101 I
Bm2567 Brugia malayi Bm2567 D
BTMF_0001659501 Brugia timori BTMF_0001659501 I
BTMF_0001653601 Brugia timori BTMF_0001653601 I
BXY_0352300 Bursaphelenchus xylophilus BXY_0352300 I
BXY_0200700 Bursaphelenchus xylophilus BXY_0200700 I
CBN06605 Caenorhabditis brenneri CBN06605 D
CBG09413 Caenorhabditis briggsae CBG09413 D
dmd-3 Caenorhabditis elegans WBGene00012832 D
dmd-10 Caenorhabditis elegans WBGene00007929 D
CJA37832 Caenorhabditis japonica CJA37832 I
CJA05020 Caenorhabditis japonica CJA05020 I
CRE31027 Caenorhabditis remanei CRE31027 I
nDi.2.2.2.g10419 Dirofilaria immitis nDi.2.2.2.g10419 I
nDi.2.2.2.g08811 Dirofilaria immitis nDi.2.2.2.g08811 I
DME_0001004201 Dracunculus medinensis DME_0001004201 I
EEL_0000689901 Elaeophora elaphi EEL_0000689901 I
EVEC_0001123001 Enterobius vermicularis EVEC_0001123001 I
Hba_18605 Heterorhabditis bacteriophora Hba_18605 I
nLs.2.1.2.g05589 Litomosoides sigmodontis nLs.2.1.2.g05589 I
LOAG_11460 Loa loa LOAG_11460 I
NECAME_07661 Necator americanus NECAME_07661 I
NBR_0000774001 Nippostrongylus brasiliensis NBR_0000774001 I
OESDEN_09202 Oesophagostomum dentatum OESDEN_09202 I
nOo.2.0.1.g05035 Onchocerca ochengi nOo.2.0.1.g05035 I
nOo.2.0.1.g12565 Onchocerca ochengi nOo.2.0.1.g12565 I
PTRK_0001597400 Parastrongyloides trichosuri PTRK_0001597400 I
CJA05633_CONSTRUCT PBM CONSTRUCTS CJA05633_CONSTRUCT D
L596_g998 Steinernema carpocapsae L596_g998 I
L889_g10733 Steinernema feltiae L889_g10733 I
L893_g31098 Steinernema glaseri L893_g31098 I
L898_g30067 Steinernema monticolum L898_g30067 I
L898_g33808 Steinernema monticolum L898_g33808 I
L892_g22881 Steinernema scapterisci L892_g22881 I
L892_g27879 Steinernema scapterisci L892_g27879 I
SPAL_0001233100 Strongyloides papillosus SPAL_0001233100 I
SVE_0753200 Strongyloides venezuelensis SVE_0753200 I
SVE_1703300 Strongyloides venezuelensis SVE_1703300 I
TELCIR_05158 Teladorsagia circumcincta TELCIR_05158 I
TCLT_0000243901 Thelazia callipaeda TCLT_0000243901 I
WUBG_11979 Wuchereria bancrofti WUBG_11979 D