GLYMA20G23180 (Glycine max)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 GLYMA20G23180 T118448_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
AT5G03510
M00860_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT14 		0.800 0.783
AT5G04390
M01857_2.00 		Arabidopsis thaliana
NNHRSWN
NWSYDNN		 PBM
Weirauch et al.(2014)
pTH7158 		0.795 0.804
AT5G04390
M06819_2.00 		Arabidopsis thaliana
HHHHWHCACTN
NAGTGDWDDDD		 Dap-seq
OMalley et al.(2016)
At5g04390_col200_a 		0.795 0.804
AT3G53600
M01856_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7188 		0.786 0.783
AT3G53600
M00858_2.00 		Arabidopsis thaliana
NNNNRSWN
NWSYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT18 		0.786 0.783
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.774 0.696
ZAT7
M01855_2.00 		Arabidopsis thaliana
NVDBRCACTNNNN
NNNNAGTGYVHBN		 PBM
Weirauch et al.(2014)
pTH7540 		0.771 0.761
AT3G46070
M06813_2.00 		Arabidopsis thaliana
HYHHYHTCACTYHHH
DDDRAGTGADRDDRD		 Dap-seq
OMalley et al.(2016)
AT3G46070_col_a 		0.763 0.804
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA20G23180.1 C2H2 ZF 34 56
GLYMA20G23180.1 C2H2 ZF 81 103

Links

Other C2H2 ZF family TFs
Other Glycine max TFs

391 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g04294 Acanthocheilonema viteae nAv.1.0.1.g04294 N 0.000
AAEL000577 Aedes aegypti AAEL000577 I 0.000
ENSAMEG00000000278 Ailuropoda melanoleuca ENSAMEG00000000278 I 0.000
ENSAPLG00000002882 Anas platyrhynchos ENSAPLG00000002882 I 0.000
ANCCAN_14716 Ancylostoma caninum ANCCAN_14716 N 0.000
ANCCEY_13935 Ancylostoma ceylanicum ANCCEY_13935 N 0.000
ACOC_0000493901 Angiostrongylus costaricensis ACOC_0000493901 N 0.000
ASIM_0001085501 Anisakis simplex ASIM_0001085501 N 0.000
BGIBMGA003479 Bombyx mori BGIBMGA003479 I 0.000
ENSP00000251808-D1 Bos grunniens ENSP00000251808-D1 I 0.000
GRHL2 Bos taurus ENSBTAG00000004518 I 0.000
Bm6679 Brugia malayi Bm6679 N 0.000
BXY_1053400 Bursaphelenchus xylophilus BXY_1053400 N 0.000
CBN22200 Caenorhabditis brenneri CBN22200 N 0.000
grh-1 Caenorhabditis elegans WBGene00001707 N 0.000
CRE28107 Caenorhabditis remanei CRE28107 N 0.000
GRHL2 Callithrix jacchus ENSCJAG00000015886 I 0.000
Cflo_10585--XP_394553.3_APIME Camponotus floridanus Cflo_10585--XP_394553.3_APIME I 0.000
Cmyd_10003336 Chelonia mydas Cmyd_10003336 I 0.000
ENSCSAG00000011989 Chlorocebus sabaeus ENSCSAG00000011989 I 0.000
CLEC003471 Cimex lectularius CLEC003471 I 0.000
KGM_04625 Danaus plexippus KGM_04625 I 0.000
grhl2b Danio rerio ENSDARG00000061974 I 0.000
grhl1 Danio rerio ENSDARG00000061391 I 0.000
DAPPUDRAFT_64332 Daphnia pulex DAPPUDRAFT_64332 I 0.000
GRHL2 Dasypus novemcinctus ENSDNOG00000048641 I 0.000
YQE_09165 Dendroctonus ponderosae YQE_09165 I 0.000
DICVIV_02142 Dictyocaulus viviparus DICVIV_02142 N 0.000
DME_0000295201 Dracunculus medinensis DME_0000295201 N 0.000
GG21828 Drosophila erecta FBgn0114006 I 0.000
GH22029 Drosophila grimshawi FBgn0129490 I 0.000
grh Drosophila melanogaster FBgn0259211 D 0.000
GL17227 Drosophila persimilis FBgn0154830 I 0.000
GA30279 Drosophila pseudoobscura FBgn0263821 I 0.000
GM21828 Drosophila sechellia FBgn0176705 I 0.000
GD11322 Drosophila simulans FBgn0183071 I 0.000
GK22232 Drosophila willistoni FBgn0224217 I 0.000
grh Drosophila yakuba FBgn0067967 I 0.000
GRHL2 Felis catus ENSFCAG00000004963 I 0.000
ENSGALG00000014208 Gallus gallus ENSGALG00000014208 I 0.000
GPLIN_000211500 Globodera pallida GPLIN_000211500 N 0.000
GPUH_0000076201 Gongylonema pulchrum GPUH_0000076201 N 0.000
HPLM_0001248301 Haemonchus placei HPLM_0001248301 N 0.000
HHAL002635-PA Halyomorpha halys HHAL002635-PA I 0.000
Hsal_11404--XP_394553.3_APIME Harpegnathos saltator Hsal_11404--XP_394553.3_APIME I 0.000
GRHL2 Homo sapiens ENSG00000083307 D 0.000
ISCW008081 Ixodes scapularis ISCW008081 I 0.000
ENSLACG00000006172 Latimeria chalumnae ENSLACG00000006172 I 0.000
nLs.2.1.2.g09328 Litomosoides sigmodontis nLs.2.1.2.g09328 N 0.000
LOAG_16319 Loa loa LOAG_16319 I 0.000
GRHL2 Loxodonta africana ENSLAFG00000010356 I 0.000
LCUP010302 Lucilia cuprina LCUP010302 I 0.000
GRHL2 Meleagris gallopavo ENSMGAG00000012259 I 0.000
MCINX002723 Melitaea cinxia MCINX002723 I 0.000
maker-nMf.1.1.scaf04793-snap-gene-0.5 Meloidogyne floridensis maker-nMf.1.1.scaf04793-snap-gene-0.5 N 0.000
MhA1_Contig165.frz3.gene13 Meloidogyne hapla MhA1_Contig165.frz3.gene13 N 0.000
GRHL2 Microcebus murinus ENSMICG00000014771 I 0.000
MDOA000476 Musca domestica MDOA000476 I 0.000
ENSMPUG00000015153 Mustela putorius furo ENSMPUG00000015153 I 0.000
Grhl2 Mus musculus ENSMUSG00000022286 D 0.000
Myotis_brandtii_GRHL2_10032153 Myotis brandtii Myotis_brandtii_GRHL2_10032153 I 0.000
GRHL2 Myotis lucifugus ENSMLUG00000010961 I 0.000
NV11321 Nasonia vitripennis NV11321 I 0.000
NECAME_01451 Necator americanus NECAME_01451 N 0.000
NBR_0001111401 Nippostrongylus brasiliensis NBR_0001111401 I 0.000
ENSNLEG00000003271 Nomascus leucogenys ENSNLEG00000003271 I 0.000
nOo.2.0.1.g11008 Onchocerca ochengi nOo.2.0.1.g11008 N 0.000
WBGene00238278 Onchocerca volvulus WBGene00238278 N 0.000
GRHL2 Ornithorhynchus anatinus ENSOANG00000004305 I 0.000
GRHL2 Otolemur garnettii ENSOGAG00000004751 I 0.000
ENSOARG00000018325 Ovis aries ENSOARG00000018325 I 0.000
GRHL2 Pan troglodytes ENSPTRG00000020479 I 0.000
ENSPANG00000017807 Papio anubis ENSPANG00000017807 I 0.000
ENSPSIG00000003669 Pelodiscus sinensis ENSPSIG00000003669 I 0.000
PPA28053 Pristionchus pacificus PPA28053 N 0.000
Grhl2 Rattus norvegicus ENSRNOG00000007000 I 0.000
RPRC012881 Rhodnius prolixus RPRC012881 I 0.000
nRc.2.0.1.g43599 Romanomermis culicivorax nRc.2.0.1.g43599 N 0.000
ENSSHAG00000015849 Sarcophilus harrisii ENSSHAG00000015849 I 0.000
SBAD_0000224801 Soboliphyme baturini SBAD_0000224801 N 0.000
L596_g19661 Steinernema carpocapsae L596_g19661 N 0.000
L893_g32968 Steinernema glaseri L893_g32968 N 0.000
L893_g6531 Steinernema glaseri L893_g6531 N 0.000
L898_g14382 Steinernema monticolum L898_g14382 N 0.000
SMAR000355 Strigamia maritima SMAR000355 I 0.000
SSTP_0000594700 Strongyloides stercoralis SSTP_0000594700 N 0.000
GRHL2 Sus scrofa ENSSSCG00000006060 I 0.000
ENSTGUG00000012086 Taeniopygia guttata ENSTGUG00000012086 I 0.000
TELCIR_08176 Teladorsagia circumcincta TELCIR_08176 N 0.000
TCNE_0000897001 Toxocara canis TCNE_0000897001 N 0.000
TC004589 Tribolium castaneum TC004589 I 0.000
TMUE_s0024003700 Trichuris muris TMUE_s0024003700 N 0.000
TMUE_s0040003800 Trichuris muris TMUE_s0040003800 N 0.000
TTRE_0000249401 Trichuris trichiura TTRE_0000249401 N 0.000
TTRE_0000375101 Trichuris trichiura TTRE_0000375101 N 0.000
GRHL2 Tursiops truncatus ENSTTRG00000005794 I 0.000
grhl2 Xenopus tropicalis XB-GENE-485995 I 0.000