CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ONIVA03G42150
(
Oryza nivara
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ONIVA03G42150
T124955_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ONIVA03G42150.1
C2H2 ZF
257
279
FTCRRCNVKRFSVVADLRTHEKH
ONIVA03G42150.1
C2H2 ZF
278
305
KHCGRDRWVCSCGTSFSRKDKLFAHVAI
Links
Other
C2H2 ZF
family TFs
Other
Oryza nivara
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MLOC_53526
Hordeum vulgare
MLOC_53526
N
0.763
ORGLA03G0371300
Oryza glaberrima
ORGLA03G0371300
N
0.827
OGLUM03G40140
Oryza glumaepatula
OGLUM03G40140
N
0.827
BGIOSGA013905
Oryza indica
BGIOSGA013905
N
0.827
OLONG_012144
Oryza longistaminata
OLONG_012144
N
0.827
OMERI03G37110
Oryza meridionalis
OMERI03G37110
N
0.827
ORUFI03G42070
Oryza rufipogon
ORUFI03G42070
N
0.827
OS03G0838800
Oryza sativa
OS03G0838800
N
0.827
Traes_4AL_FC7AEBB05
Triticum aestivum
Traes_4AL_FC7AEBB05
N
0.767
Traes_5BL_BA26BA910
Triticum aestivum
Traes_5BL_BA26BA910
N
0.773
TRIUR3_27533
Triticum urartu
TRIUR3_27533
N
0.773
GRMZM2G470422
Zea mays
GRMZM2G470422
N
0.788