Afo_R004479 (Aptenodytes forsteri)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Afo_R004479 T132788_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Zfp410
M00140_2.00 		Mus musculus
CYATCCCA
TGGGATRG		 PBM
Badis et al.(2009)
Zfp410_3034 		0.804 0.957
ZNF410
M02882_2.00 		Homo sapiens
KVNTATTATGGGATGKN
NMCATCCCATAATANBM		 SELEX
Jolma et al.(2013)
ZNF410_1 		0.804 0.957
ZNF410
M04435_2.00 		Homo sapiens
NTATTATGGGNTRB
VYANCCCATAATAN		 SELEX
Yin et al.(2017)
ZNF410_eDBD_HT-SELEX 		0.804 0.957
ZNF410
M04436_2.00 		Homo sapiens
NTATTATGGGHTRB
VYADCCCATAATAN		 SELEX
Yin et al.(2017)
ZNF410_eDBD_Methyl-HT-SELEX 		0.804 0.957
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R004479 C2H2 ZF 217 241
Afo_R004479 C2H2 ZF 247 271
Afo_R004479 C2H2 ZF 277 301
Afo_R004479 C2H2 ZF 307 331
Afo_R004479 C2H2 ZF 337 360

Links

Other C2H2 ZF family TFs
Other Aptenodytes forsteri TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000012921 Ailuropoda melanoleuca ENSAMEG00000012921 I
Alligator_sinensis_CCG007024.1 Alligator sinensis Alligator_sinensis_CCG007024.1 I
ZBTB12 Anolis carolinensis ENSACAG00000011189 I
ZBTB12 Bos taurus ENSBTAG00000032031 I
ZBTB12 Canis familiaris ENSCAFG00000000674 I
ZBTB12 Felis catus ENSFCAG00000031296 I
ENSGGOG00000015638 Gorilla gorilla ENSGGOG00000015638 I
ZBTB12 Homo sapiens ENSG00000204366 D
ENSSTOG00000027411 Ictidomys tridecemlineatus ENSSTOG00000027411 I
ENSLACG00000006007 Latimeria chalumnae ENSLACG00000006007 I
ZBTB12 Macaca mulatta ENSMMUG00000011683 I
ZBTB12 Microcebus murinus ENSMICG00000003600 I
ENSMODG00000015096 Monodelphis domestica ENSMODG00000015096 I
ENSMPUG00000018357 Mustela putorius furo ENSMPUG00000018357 I
Zbtb12 Mus musculus ENSMUSG00000049823 D
Myotis_brandtii_ZBTB12_10007235 Myotis brandtii Myotis_brandtii_ZBTB12_10007235 I
Ogr11440 Ophisaurus gracilis Ogr11440 I
ZBTB12 Otolemur garnettii ENSOGAG00000031042 I
ENSPANG00000003484 Papio anubis ENSPANG00000003484 I
Pvit_00817 Pogona vitticeps Pvit_00817 I
ZBTB12 Pteropus vampyrus ENSPVAG00000005130 I
Zbtb12 Rattus norvegicus ENSRNOG00000000418 I
ENSSHAG00000008383 Sarcophilus harrisii ENSSHAG00000008383 I
ZBTB12 Sus scrofa ENSSSCG00000001421 I
zbtb12.L Xenopus laevis XB-GENE-865454 I
XP_002943018 Xenopus tropicalis XP_002943018 I