CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Alligator_sinensis_CCG005558.1 *(Alligator sinensis)* C2H2 ZF
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00096 (zf-C2H2)	IPR007087	Alligator_sinensis_CCG005558.1	T133137_2.00	GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZNF282 M02904_2.00	Homo sapiens	BTTTCCCMYAACACKNN	NNMGTGTTRKGGGAAAV	SELEX Jolma et al.(2013) ZNF282_1	0.762	0.809
ZNF282 M04541_2.00	Homo sapiens	NHTCCCMYNACMCK	MGKGTNRKGGGADN	SELEX Yin et al.(2017) ZNF282_eDBD_HT-SELEX	0.762	0.809
ZNF282 M05849_2.00	Homo sapiens	HMTCCCRCMCC	GGKGYGGGAKD	SMiLE-seq Isakova et al.(2017) ZNF282	0.762	0.809
ZNF282 M07626_2.00	Homo sapiens	CTCCCS	SGGGAG	ChIP-seq+ChIP-exo Barazandeh et al.(2018) ZNF282.RCADE.ReprocessedData	0.762	0.809
ZNF282 M04542_2.00	Homo sapiens	HWTCCCMYVACMCN	NGKGTBRKGGGAWD	SELEX Yin et al.(2017) ZNF282_eDBD_Methyl-HT-SELEX	0.762	0.809
For this family, TFs with SR scores > 0.755* will likely have a similar motif*

Links
Other C2H2 ZF family TFs
Other *Alligator sinensis* TFs