Gfo_R008104 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R008104 T135766_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OVOL2
M00234_2.00 		Homo sapiens
NCCGYTANNN
NNNTARCGGN		 PBM
Barrera et al.(2016)
OVOL2_D228E 		0.807 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R008104 C2H2 ZF 46 68
Gfo_R008104 C2H2 ZF 70 96
Gfo_R008104 C2H2 ZF 102 125
Gfo_R008104 C2H2 ZF 141 164

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZMAT1 Callithrix jacchus ENSCJAG00000019724 N 0.000
ZMAT1 Gorilla gorilla ENSGGOG00000025784 N 0.000
ZMAT1 Homo sapiens ENSG00000166432 N 0.000
ENSSTOG00000011140 Ictidomys tridecemlineatus ENSSTOG00000011140 N 0.000
ENSMMUP00000002870 Macaca fascicularis ENSMMUP00000002870 N 0.000
ZMAT1 Macaca mulatta ENSMMUG00000002151 N 0.000
ENSNLEG00000007550 Nomascus leucogenys ENSNLEG00000007550 N 0.000
ENSOPRG00000009950 Ochotona princeps ENSOPRG00000009950 N 0.000
ZMAT1 Otolemur garnettii ENSOGAG00000033601 N 0.000
ENSPTRG00000022112 Pan troglodytes ENSPTRG00000022112 N 0.000
ENSPTRG00000041840 Pan troglodytes ENSPTRG00000041840 N 0.000
ENSPPYG00000020561 Pongo abelii ENSPPYG00000020561 N 0.000
ENSTSYG00000007330 Tarsius syrichta ENSTSYG00000007330 N 0.000