Gfo_R008104 (Geospiza fortis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Gfo_R008104 T135766_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OVOL2
M00234_2.00 		Homo sapiens
NCCGYTANNN
NNNTARCGGN		 PBM
Barrera et al.(2016)
OVOL2_D228E 		0.807 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gfo_R008104 C2H2 ZF 46 68
Gfo_R008104 C2H2 ZF 70 96
Gfo_R008104 C2H2 ZF 102 125
Gfo_R008104 C2H2 ZF 141 164

Links

Other C2H2 ZF family TFs
Other Geospiza fortis TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
OVOL2 Callithrix jacchus ENSCJAG00000005049 I 0.805
ENSFALG00000007594 Ficedula albicollis ENSFALG00000007594 I 0.767
OVOL2 Taeniopygia guttata ENSTGUG00000005909 I 0.767
OVOL2 Gallus gallus ENSGALG00000008702 I 0.762
ENSMGAG00000006770 Meleagris gallopavo ENSMGAG00000006770 I 0.762
Aan_R006310 Calypte anna Aan_R006310 I 0.762
Afo_R007843 Aptenodytes forsteri Afo_R007843 I 0.762
Brh_R002739 Buceros rhinoceros Brh_R002739 I 0.762
Tal_R010801 Tyto alba Tal_R010801 I 0.762