CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
e_gw.104.41.1
(
Branchiostoma floridae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
e_gw.104.41.1
T137957_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw.104.41.1
C2H2 ZF
123
144
YTCDRCGKVFAYKYYRDKHLKY
e_gw.104.41.1
C2H2 ZF
155
178
FPCHLCTRSFEKRDRLRIHILHVH
e_gw.104.41.1
C2H2 ZF
184
206
HKCSVCGKCFSQSSSLNKHMRVH
e_gw.104.41.1
C2H2 ZF
212
234
YKCVYCSKAFTASSILRTHIRQH
e_gw.104.41.1
C2H2 ZF
240
263
FKCKHCGKAFASHAAHDSHVRRTH
e_gw.104.41.1
C2H2 ZF
269
291
CACSVCGKFFAQPYELKFHMNTH
Links
Other
C2H2 ZF
family TFs
Other
Branchiostoma floridae
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
e_gw.386.8.1
Branchiostoma floridae
e_gw.386.8.1
N
0.827
CapteG103287
Capitella teleta
CapteG103287
N
0.791
CGI_10003238
Crassostrea gigas
CGI_10003238
N
0.763
NEMVEDRAFT_v1g104327
Nematostella vectensis
NEMVEDRAFT_v1g104327
N
0.771
NEMVEDRAFT_v1g96522
Nematostella vectensis
NEMVEDRAFT_v1g96522
N
0.787