CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
NEMVEDRAFT_v1g104327
(
Nematostella vectensis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
NEMVEDRAFT_v1g104327
T124134_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EDO41385
C2H2 ZF
128
149
FACERCGKVFAYEYYRDKHLKY
EDO41385
C2H2 ZF
160
184
FPCTLCDRSFEKRDRLRIHVLHVHH
EDO41385
C2H2 ZF
189
211
HQCSVCSKRFSQSSSLNKHMRVH
EDO41385
C2H2 ZF
217
239
YKCPYCEKAFTASSILRTHVRQH
EDO41385
C2H2 ZF
245
268
FKCKHCGKAFASHAAHDSHVRRTH
EDO41385
C2H2 ZF
274
296
CVCHFCGKAFAQSYELKFHINMH
Links
Other
C2H2 ZF
family TFs
Other
Nematostella vectensis
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
NEMVEDRAFT_v1g96522
Nematostella vectensis
NEMVEDRAFT_v1g96522
N
0.799
e_gw.104.41.1
Branchiostoma floridae
e_gw.104.41.1
N
0.771
e_gw.386.8.1
Branchiostoma floridae
e_gw.386.8.1
N
0.771
CapteG103287
Capitella teleta
CapteG103287
N
0.768