CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10028757m.g
(
Citrus clementina
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ciclev10028757m.g
T142792_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10028757m
C2H2 ZF
265
286
FMCRKCGKTFAVKGDWRTHEKN
Ciclev10028757m
C2H2 ZF
285
311
KNCGKLWYCTCGSDFKHKRSLKDHIRS
Links
Other
C2H2 ZF
family TFs
Other
Citrus clementina
TFs
305 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BRADI2G52227
Brachypodium distachyon
BRADI2G52227
N
0.000
LPERR11G20420
Leersia perrieri
LPERR11G20420
N
0.000
OBART11G23670
Oryza barthii
OBART11G23670
N
0.000
OB11G28090
Oryza brachyantha
OB11G28090
N
0.000
ORGLA11G0190200
Oryza glaberrima
ORGLA11G0190200
N
0.000
ORGLA11G0190300
Oryza glaberrima
ORGLA11G0190300
N
0.000
BGIOSGA035741
Oryza indica
BGIOSGA035741
N
0.000
ONIVA11G23190
Oryza nivara
ONIVA11G23190
N
0.000
ORUFI11G25540
Oryza rufipogon
ORUFI11G25540
N
0.000
ORUFI11G25550
Oryza rufipogon
ORUFI11G25550
N
0.000
OS11G0705200
Oryza sativa
OS11G0705200
N
0.000
Pavir.Ha00317
Panicum virgatum
Pavir.Ha00317
N
0.000