Lus10015888.g (Linum usitatissimum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Lus10015888.g T143113_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ZAT9
M06817_2.00 		Arabidopsis thaliana
YTACTWHH
DDWAGTAR		 Dap-seq
OMalley et al.(2016)
At3g60580_col_a 		0.800 0.804
ZAT4
M01168_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Lambert et al.(2019)
pTH11142 		0.800 0.783
AZF2
M01854_2.00 		Arabidopsis thaliana
NASTRNN
NNYASTN		 PBM
Weirauch et al.(2014)
pTH8258 		0.783 0.674
ZAT1
M01167_2.00 		Arabidopsis thaliana
NHRCTNN
NNAGYDN		 PBM
Lambert et al.(2019)
pTH10246 		0.775 0.761
ZAT10
M01852_2.00 		Arabidopsis thaliana
NNHASWN
NWSTDNN		 PBM
Weirauch et al.(2014)
pTH7255 		0.760 0.652
ZAT10
M06799_2.00 		Arabidopsis thaliana
WSHHCACT
AGTGDDSW		 Dap-seq
OMalley et al.(2016)
STZ_colamp_a 		0.760 0.652
ZAT10
M06800_2.00 		Arabidopsis thaliana
YWSHNHCASTN
NASTGDNDSWR		 Dap-seq
OMalley et al.(2016)
STZ_col 		0.760 0.652
ZAT6
M00861_2.00 		Arabidopsis thaliana
NNHRSTN
NASYDNN		 PBM
Franco-Zorrilla et al.(2014)
ZAT6 		0.759 0.630
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10015888 C2H2 ZF 135 157
Lus10015888 C2H2 ZF 177 199

Links

Other C2H2 ZF family TFs
Other Linum usitatissimum TFs

194 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g01027 Acanthocheilonema viteae nAv.1.0.1.g01027 I
nAv.1.0.1.g01655 Acanthocheilonema viteae nAv.1.0.1.g01655 I
ACYPI005934 Acyrthosiphon pisum ACYPI005934 I
USP Aedes aegypti AAEL000395 I
AAEL005381 Aedes aegypti AAEL005381 I
PNRLIKE Aedes aegypti AAEL008043 I
ENSAMEG00000008117 Ailuropoda melanoleuca ENSAMEG00000008117 I
Alligator_sinensis_CCG021621.1 Alligator sinensis Alligator_sinensis_CCG021621.1 I
ENSAPLG00000010675 Anas platyrhynchos ENSAPLG00000010675 I
ANCCAN_24590 Ancylostoma caninum ANCCAN_24590 I
ACAC_0001268701 Angiostrongylus cantonensis ACAC_0001268701 I
ACOC_0000908001 Angiostrongylus costaricensis ACOC_0000908001 I
ASIM_0001060801 Anisakis simplex ASIM_0001060801 I
NR2E1 Anolis carolinensis ENSACAG00000005957 I
AALB000508 Anopheles albimanus AALB000508 I
AALB002625 Anopheles albimanus AALB002625 I
AALB002684 Anopheles albimanus AALB002684 I
AARA001809 Anopheles arabiensis AARA001809 I
AARA006848 Anopheles arabiensis AARA006848 I
AARA011806 Anopheles arabiensis AARA011806 I
AATE006105 Anopheles atroparvus AATE006105 I
AATE017601 Anopheles atroparvus AATE017601 I
ACHR004296 Anopheles christyi ACHR004296 N
ACHR006241 Anopheles christyi ACHR006241 I
ACOM032542 Anopheles coluzzii ACOM032542 I
ACOM042234 Anopheles coluzzii ACOM042234 I
ACUA020513 Anopheles culicifacies ACUA020513 I
ACUA020556 Anopheles culicifacies ACUA020556 I
ADAC008563 Anopheles darlingi ADAC008563 I
ADIR003190 Anopheles dirus ADIR003190 I
ADIR010552 Anopheles dirus ADIR010552 I
ADIR011495 Anopheles dirus ADIR011495 I
AEPI001141 Anopheles epiroticus AEPI001141 I
AEPI005174 Anopheles epiroticus AEPI005174 I
AFAF007327 Anopheles farauti AFAF007327 I
AFAF008350 Anopheles farauti AFAF008350 I
AFAF018414 Anopheles farauti AFAF018414 I
AFUN001116 Anopheles funestus AFUN001116 I
AFUN008855 Anopheles funestus AFUN008855 I
AFUN009463 Anopheles funestus AFUN009463 I
AGAP001348 Anopheles gambiae AGAP001348 I
USP Anopheles gambiae AGAP002095 I
AGAP009575 Anopheles gambiae AGAP009575 I
AMAM020935 Anopheles maculatus AMAM020935 I
AMEC009570 Anopheles melas AMEC009570 I
AMEC010971 Anopheles melas AMEC010971 I
AMEC013916 Anopheles melas AMEC013916 I
AMEC022423 Anopheles melas AMEC022423 I
AMEM007574 Anopheles merus AMEM007574 I
AMEM008174 Anopheles merus AMEM008174 I
AMIN000538 Anopheles minimus AMIN000538 I
AMIN000644 Anopheles minimus AMIN000644 I
AQUA006534 Anopheles quadriannulatus AQUA006534 I
AQUA007553 Anopheles quadriannulatus AQUA007553 I
AQUA008924 Anopheles quadriannulatus AQUA008924 I
ASIS007484 Anopheles sinensis ASIS007484 I
ASIS017452 Anopheles sinensis ASIS017452 I
ASTEI00398 Anopheles stephensi ASTEI00398 I
ASTEI03772 Anopheles stephensi ASTEI03772 I
ASTEI07503 Anopheles stephensi ASTEI07503 I
GB42692 Apis mellifera GB42692 I
GB50458 Apis mellifera GB50458 I
GB52015 Apis mellifera GB52015 I
ALUE_0000403201 Ascaris lumbricoides ALUE_0000403201 I
ALUE_0000688601 Ascaris lumbricoides ALUE_0000688601 I
ASU_00538 Ascaris suum ASU_00538 I
ASU_07782 Ascaris suum ASU_07782 I
ASU_13270 Ascaris suum ASU_13270 I
ACEP27077 Atta cephalotes ACEP27077 I
BGLB000662 Biomphalaria glabrata BGLB000662 I
BGLB009763 Biomphalaria glabrata BGLB009763 I
BGIBMGA000670 Bombyx mori BGIBMGA000670 I
BGIBMGA006183 Bombyx mori BGIBMGA006183 I
ENSBTAP00000018594-D1 Bos grunniens ENSBTAP00000018594-D1 I
NR2E1 Bos taurus ENSBTAG00000013991 I
e_gw.333.48.1 Branchiostoma floridae e_gw.333.48.1 I
e_gw.356.102.1 Branchiostoma floridae e_gw.356.102.1 I
gw.353.21.1 Branchiostoma floridae gw.353.21.1 I
Bm12516 Brugia malayi Bm12516 I
Bm2078 Brugia malayi Bm2078 I
BTMF_0000437701 Brugia timori BTMF_0000437701 I
BXY_0757200 Bursaphelenchus xylophilus BXY_0757200 I
CBN10913 Caenorhabditis brenneri CBN10913 I
CBG16821 Caenorhabditis briggsae CBG16821 I
nhr-236 Caenorhabditis elegans WBGene00021417 I
NR2E1 Callithrix jacchus ENSCJAG00000005966 I
Aan_R007044 Calypte anna Aan_R007044 I
Cflo_04264--XP_624265.2_APIME Camponotus floridanus Cflo_04264--XP_624265.2_APIME I
Cflo_11610--XP_624042.1_APIME Camponotus floridanus Cflo_11610--XP_624042.1_APIME I
NR2E1 Canis familiaris ENSCAFG00000003761 I
CapteG224811 Capitella teleta CapteG224811 I
CapteG53417 Capitella teleta CapteG53417 I
NR2E1 Cavia porcellus ENSCPOG00000000097 I
Cmyd_10021619 Chelonia mydas Cmyd_10021619 I
ENSCSAG00000015143 Chlorocebus sabaeus ENSCSAG00000015143 I
NR2E1 Choloepus hoffmanni ENSCHOG00000007344 I
CLEC005164 Cimex lectularius CLEC005164 I
CLEC008419 Cimex lectularius CLEC008419 I
csin110418 Clonorchis sinensis csin110418 I
CGI_10027671 Crassostrea gigas CGI_10027671 I
CpipJ_CPIJ016024 Culex pipiens CpipJ_CPIJ016024 I
CpipJ_CPIJ017884 Culex pipiens CpipJ_CPIJ017884 I
CPIJ016024 Culex quinquefasciatus CPIJ016024 I
CPIJ017884 Culex quinquefasciatus CPIJ017884 I
CGOC_0000088801 Cylicostephanus goldi CGOC_0000088801 I
KGM_01261 Danaus plexippus KGM_01261 I
KGM_02557 Danaus plexippus KGM_02557 I
KGM_05745 Danaus plexippus KGM_05745 I
KGM_12726 Danaus plexippus KGM_12726 I
nr2e1 Danio rerio ENSDARG00000017107 I
DAPPUDRAFT_116667 Daphnia pulex DAPPUDRAFT_116667 I
DAPPUDRAFT_219609 Daphnia pulex DAPPUDRAFT_219609 I
DAPPUDRAFT_299736 Daphnia pulex DAPPUDRAFT_299736 I
NR2E1 Dasypus novemcinctus ENSDNOG00000015478 I
YQE_08225 Dendroctonus ponderosae YQE_08225 I
YQE_09004 Dendroctonus ponderosae YQE_09004 I
YQE_10677 Dendroctonus ponderosae YQE_10677 I
nDi.2.2.2.g01137 Dirofilaria immitis nDi.2.2.2.g01137 I
nDi.2.2.2.g02808 Dirofilaria immitis nDi.2.2.2.g02808 I
DME_0000202701 Dracunculus medinensis DME_0000202701 I
DME_0000238901 Dracunculus medinensis DME_0000238901 I
DME_0000705401 Dracunculus medinensis DME_0000705401 I
GF15588 Drosophila ananassae FBgn0092613 I
GF21986 Drosophila ananassae FBgn0098985 I
GG12659 Drosophila erecta FBgn0104947 I
GG25103 Drosophila erecta FBgn0117232 I
GH11011 Drosophila grimshawi FBgn0118492 I
GH24408 Drosophila grimshawi FBgn0131864 I
usp Drosophila melanogaster FBgn0003964 D
dsf Drosophila melanogaster FBgn0015381 D
GI15428 Drosophila mojavensis FBgn0138177 I
GI17531 Drosophila mojavensis FBgn0140275 I
GL15129 Drosophila persimilis FBgn0152733 I
GL19043 Drosophila persimilis FBgn0156644 I
GA18146 Drosophila pseudoobscura FBgn0078154 I
GA21482 Drosophila pseudoobscura FBgn0081468 I
GM18579 Drosophila sechellia FBgn0173485 I
GM18927 Drosophila sechellia FBgn0173830 I
GD23369 Drosophila simulans FBgn0194755 I
GJ15408 Drosophila virilis FBgn0202602 I
GJ16389 Drosophila virilis FBgn0203573 I
GK14705 Drosophila willistoni FBgn0216711 I
GK25746 Drosophila willistoni FBgn0227705 I
GE16988 Drosophila yakuba FBgn0234474 I
GE25723 Drosophila yakuba FBgn0242781 I
EEL_0000988401 Elaeophora elaphi EEL_0000988401 I
EVEC_0000945501 Enterobius vermicularis EVEC_0000945501 I
NR2E1 Equus caballus ENSECAG00000018990 I
NR2E1 Erinaceus europaeus ENSEEUG00000015193 I
D915_09414 Fasciola hepatica D915_09414 I
NR2E1 Felis catus ENSFCAG00000002255 I
ENSFALG00000011755 Ficedula albicollis ENSFALG00000011755 I
ENSGMOG00000016036 Gadus morhua ENSGMOG00000016036 I
NR2E1 Gallus gallus ENSGALG00000015305 I
nr2e1 Gasterosteus aculeatus ENSGACG00000008934 I
Gfo_R016106 Geospiza fortis Gfo_R016106 I
GPLIN_000079400 Globodera pallida GPLIN_000079400 I
GPLIN_000097300 Globodera pallida GPLIN_000097300 I
GPUH_0001303601 Gongylonema pulchrum GPUH_0001303601 I
ENSGGOG00000010051 Gorilla gorilla ENSGGOG00000010051 I
ENSGGOG00000027453 Gorilla gorilla ENSGGOG00000027453 I
HCOI00499200 Haemonchus contortus HCOI00499200 I
HCOI00563400 Haemonchus contortus HCOI00563400 I
HPLM_0000273901 Haemonchus placei HPLM_0000273901 I
HHAL002788-PA Halyomorpha halys HHAL002788-PA I
Hsal_03554--XP_624042.1_APIME Harpegnathos saltator Hsal_03554--XP_624042.1_APIME I
Hsal_12124--XP_624265.2_APIME Harpegnathos saltator Hsal_12124--XP_624265.2_APIME I
HMEL005004 Heliconius melpomene HMEL005004 I
HMEL013397 Heliconius melpomene HMEL013397 I
HPBE_0001507701 Heligmosomoides bakeri HPBE_0001507701 I
HelroG148449 Helobdella robusta HelroG148449 I
HelroG190681 Helobdella robusta HelroG190681 I
HelroG81672 Helobdella robusta HelroG81672 I
Hba_13386 Heterorhabditis bacteriophora Hba_13386 I
NR2E1 Homo sapiens ENSG00000112333 D
XP_002154441.1 Hydra magnipapillata XP_002154441.1 N
XP_002156561.1 Hydra magnipapillata XP_002156561.1 I
ENSSTOG00000007248 Ictidomys tridecemlineatus ENSSTOG00000007248 I
ISCW005340 Ixodes scapularis ISCW005340 I
ISCW009256 Ixodes scapularis ISCW009256 I
ENSLACG00000015675 Latimeria chalumnae ENSLACG00000015675 I
ENSLOCG00000016602 Lepisosteus oculatus ENSLOCG00000016602 I
LDEC002297 Leptinotarsa decemlineata LDEC002297 I
LDEC003555 Leptinotarsa decemlineata LDEC003555 I
LotgiG120392 Lottia gigantea LotgiG120392 I
LotgiG135497 Lottia gigantea LotgiG135497 I
NR2E1 Loxodonta africana ENSLAFG00000013583 I
LCUP004818 Lucilia cuprina LCUP004818 I
LCUP005636 Lucilia cuprina LCUP005636 I
LLOJ005938 Lutzomyia longipalpis LLOJ005938 I
LLOJ008560 Lutzomyia longipalpis LLOJ008560 I
ENSP00000357979 Macaca fascicularis ENSP00000357979 I
NR2E1 Macaca mulatta ENSMMUG00000023767 I
MESCA000610 Megaselia scalaris MESCA000610 I
MESCA004444 Megaselia scalaris MESCA004444 I
MCINX005281 Melitaea cinxia MCINX005281 I
MCINX011950 Melitaea cinxia MCINX011950 I
augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf00796-processed-gene-0.1 N
maker-nMf.1.1.scaf06872-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf06872-augustus-gene-0.3 N
MhA1_Contig1097.frz3.gene5 Meloidogyne hapla MhA1_Contig1097.frz3.gene5 N
Minc02801 Meloidogyne incognita Minc02801 N
NR2E1 Monodelphis domestica ENSMODG00000018005 I
MDOA006432 Musca domestica MDOA006432 I
ENSMPUG00000009805 Mustela putorius furo ENSMPUG00000009805 I
Nr2e1 Mus musculus ENSMUSG00000019803 D
NR2E1 Myotis lucifugus ENSMLUG00000005543 I
NV15186 Nasonia vitripennis NV15186 I
NV17364 Nasonia vitripennis NV17364 I
NEMVEDRAFT_v1g132075 Nematostella vectensis NEMVEDRAFT_v1g132075 I
NEMVEDRAFT_v1g169225 Nematostella vectensis NEMVEDRAFT_v1g169225 I
NEMVEDRAFT_v1g99425 Nematostella vectensis NEMVEDRAFT_v1g99425 I
NBR_0002150401 Nippostrongylus brasiliensis NBR_0002150401 I
ENSNLEG00000013646 Nomascus leucogenys ENSNLEG00000013646 I
Ocbimv22038770m.g Octopus bimaculoides Ocbimv22038770m.g I
SNAPOd2T00007449001 Oikopleura dioica SNAPOd2T00007449001 I
OFLC_0001242901 Onchocerca flexuosa OFLC_0001242901 I
nOo.2.0.1.g00175 Onchocerca ochengi nOo.2.0.1.g00175 I
WBGene00241769 Onchocerca volvulus WBGene00241769 I
Ogr18563 Ophisaurus gracilis Ogr18563 I
T265_07403 Opisthorchis viverrini T265_07403 I
ENSONIG00000013281 Oreochromis niloticus ENSONIG00000013281 I
NR2E1 Oryctolagus cuniculus ENSOCUG00000005853 I
nr2e1 Oryzias latipes ENSORLG00000013426 I
NR2E1 Otolemur garnettii ENSOGAG00000011992 I
ENSOARG00000010848 Ovis aries ENSOARG00000010848 I
A1YGC6_PANPA Pan paniscus A1YGC6_PANPA D
NR2E1 Pan troglodytes ENSPTRG00000018472 I
ENSPANG00000016092 Papio anubis ENSPANG00000016092 I
PHUM494010 Pediculus humanus PHUM494010 I
ENSPSIG00000006035 Pelodiscus sinensis ENSPSIG00000006035 I
PPAI008488 Phlebotomus papatasi PPAI008488 I
ENSPFOG00000019532 Poecilia formosa ENSPFOG00000019532 I
Pvit_18941 Pogona vitticeps Pvit_18941 I
ENSPPYG00000016893 Pongo abelii ENSPPYG00000016893 I
scaffold431-EXSNAP2012.16 Pristionchus exspectatus scaffold431-EXSNAP2012.16 I
PPA06908 Pristionchus pacificus PPA06908 I
PXEA_0002767701 Protopolystoma xenopodis PXEA_0002767701 I
NR2E1 Pteropus vampyrus ENSPVAG00000001731 I
Nr2e1 Rattus norvegicus ENSRNOG00000050550 I
RSKR_0000792200 Rhabditophanes kr3021 RSKR_0000792200 I
RPRC009755 Rhodnius prolixus RPRC009755 I
RPRC013330 Rhodnius prolixus RPRC013330 I
Sakowv30025796m.g Saccoglossus kowalevskii Sakowv30025796m.g I
Sakowv30026672m.g Saccoglossus kowalevskii Sakowv30026672m.g I
Sakowv30030751m.g Saccoglossus kowalevskii Sakowv30030751m.g I
Sakowv30031927m.g Saccoglossus kowalevskii Sakowv30031927m.g I
ENSSHAG00000017854 Sarcophilus harrisii ENSSHAG00000017854 I
A_01819 Schistosoma haematobium A_01819 I
Sjc_0058250 Schistosoma japonicum Sjc_0058250 I
Smp_139360 Schistosoma mansoni Smp_139360 I
SMRZ_0001531701 Schistosoma margrebowiei SMRZ_0001531701 I
SMU15015045 Schmidtea mediterranea SMU15015045 I
SMU15038277 Schmidtea mediterranea SMU15038277 I
SINV14755 Solenopsis invicta SINV14755 I
NR2E1 Sorex araneus ENSSARG00000013555 I
SMAR001127 Strigamia maritima SMAR001127 I
SMAR005242 Strigamia maritima SMAR005242 I
SPU_008936 Strongylocentrotus purpuratus SPU_008936 I
SPU_017375 Strongylocentrotus purpuratus SPU_017375 I
SPU_024486 Strongylocentrotus purpuratus SPU_024486 I
SPU_027487 Strongylocentrotus purpuratus SPU_027487 I
NR2E1 Sus scrofa ENSSSCG00000004384 I
SMUV_0000987101 Syphacia muris SMUV_0000987101 I
NR2E1 Taeniopygia guttata ENSTGUG00000012147 I
nr2e1 Takifugu rubripes ENSTRUG00000001893 I
nr2f5 Takifugu rubripes ENSTRUG00000004195 I
TELCIR_04430 Teladorsagia circumcincta TELCIR_04430 I
tetur01g02690 Tetranychus urticae tetur01g02690 I
tetur01g09240 Tetranychus urticae tetur01g09240 I
tetur03g02550 Tetranychus urticae tetur03g02550 I
tetur31g01930 Tetranychus urticae tetur31g01930 I
nr2f5 Tetraodon nigroviridis ENSTNIG00000010297 I
nr2e1 Tetraodon nigroviridis ENSTNIG00000012282 I
TCLT_0000544201 Thelazia callipaeda TCLT_0000544201 I
TCLT_0000820901 Thelazia callipaeda TCLT_0000820901 I
TCNE_0000809801 Toxocara canis TCNE_0000809801 I
TCNE_0001744001 Toxocara canis TCNE_0001744001 I
TC001069 Tribolium castaneum TC001069 I
TC014027 Tribolium castaneum TC014027 I
TC030676 Tribolium castaneum TC030676 I
D917_02601 Trichinella nativa D917_02601 I
D917_07429 Trichinella nativa D917_07429 I
EFV59394 Trichinella spiralis EFV59394 I
EFV60819 Trichinella spiralis EFV60819 I
TRE_0001126701 Trichobilharzia regenti TRE_0001126701 I
TMUE_s0002021300 Trichuris muris TMUE_s0002021300 I
TMUE_s0189001000 Trichuris muris TMUE_s0189001000 I
D918_08043 Trichuris suis D918_08043 I
D918_08129 Trichuris suis D918_08129 I
TTRE_0000264801 Trichuris trichiura TTRE_0000264801 I
NR2E1 Tupaia belangeri ENSTBEG00000011676 I
NR2E1 Tursiops truncatus ENSTTRG00000008863 I
WUBG_07942 Wuchereria bancrofti WUBG_07942 N
WUBG_10076 Wuchereria bancrofti WUBG_10076 I
nr2e1.S Xenopus laevis XB-GENE-864991 I
nr2e1 Xenopus tropicalis XB-GENE-483554 I
ENSXMAG00000003283 Xiphophorus maculatus ENSXMAG00000003283 I
L798_02901 Zootermopsis nevadensis L798_02901 I
L798_09225 Zootermopsis nevadensis L798_09225 I