CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SNAPOd2T00019413001
(
Oikopleura dioica
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SNAPOd2T00019413001
T145307_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SNAPOd2T00019413001
C2H2 ZF
83
110
YFCFWNNCSRFGTPFKAKYKLVNHMRVH
SNAPOd2T00019413001
C2H2 ZF
116
138
FSCNDCGKIFARSENLKIHKRTH
SNAPOd2T00019413001
C2H2 ZF
144
168
FICPHPGCGRAFSNSSDRKKHQNVH
SNAPOd2T00019413001
C2H2 ZF
173
197
LMCPILGCDRSYSHPSSMRKHLKTH
Links
Other
C2H2 ZF
family TFs
Other
Oikopleura dioica
TFs
6 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
scaffold56-EXSNAP2012.28
Pristionchus exspectatus
scaffold56-EXSNAP2012.28
N
SMUV_0000151901
Syphacia muris
SMUV_0000151901
N
WUBG_18193
Wuchereria bancrofti
WUBG_18193
N