CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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22143_YPL038W
(
Saccharomyces mikatae
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
22143_YPL038W
T145950_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MET31
M00040_2.00
Saccharomyces cerevisiae
NNHCACCTMN
NKAGGTGDNN
PBM
Badis et al.(2008)
MET31_2146
0.808
1.000
MET31
M07470_2.00
Saccharomyces cerevisiae
MGCCACNNH
DNNGTGGCK
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0333.1
0.808
1.000
MET31
M08543_2.00
Saccharomyces cerevisiae
VCACWVYK
MRBWGTGB
Misc
DeBoer et al.(2011)
YPL038W_1370
0.808
1.000
MET31
M10402_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$MET31_01
0.808
1.000
MET32
M00022_2.00
Saccharomyces cerevisiae
NVMGCCACAV
BTGTGGCKBN
PBM
Badis et al.(2008)
MET32_2153
0.763
0.775
MET32
M01528_2.00
Saccharomyces cerevisiae
MGCCACAN
NTGTGGCK
PBM
Zhu et al.(2009)
Met32
0.763
0.775
MET32
M07452_2.00
Saccharomyces cerevisiae
MGCCACM
KGTGGCK
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0334.1
0.763
0.775
MET32
M08518_2.00
Saccharomyces cerevisiae
VHKCCACA
TGTGGMDB
Misc
DeBoer et al.(2011)
YDR253C_1375
0.763
0.775
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
22143_YPL038W
C2H2 ZF
89
106
YSCAKCQLKFSRSSDLRR
22143_YPL038W
C2H2 ZF
117
138
HICSNCGKGFARKDALKRHSNT
Links
Other
C2H2 ZF
family TFs
Other
Saccharomyces mikatae
TFs
25 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy