csin113630 (Clonorchis sinensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 csin113630 T152738_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.760 0.768
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.760 0.768
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.760 0.768
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.760 0.768
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.760 0.768
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin113630 C2H2 ZF 574 596
csin113630 C2H2 ZF 602 626
csin113630 C2H2 ZF 632 654

Links

Other C2H2 ZF family TFs
Other Clonorchis sinensis TFs

132 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_03622 Aegilops tauschii F775_03622 I
F775_22946 Aegilops tauschii F775_22946 I
F775_28212 Aegilops tauschii F775_28212 I
AMTR_s00019p00232450 Amborella trichopoda AMTR_s00019p00232450 I
AMTR_s00025p00249140 Amborella trichopoda AMTR_s00025p00249140 I
AMTR_s00150p00091360 Amborella trichopoda AMTR_s00150p00091360 I
Aquca_006_00004 Aquilegia coerulea Aquca_006_00004 I
Aquca_016_00154 Aquilegia coerulea Aquca_016_00154 I
SHN1 Arabidopsis lyrata fgenesh2_kg.1__1687__AT1G15360.1 I
fgenesh2_kg.6__2505__AT5G25190.1 Arabidopsis lyrata fgenesh2_kg.6__2505__AT5G25190.1 I
WIN1 Arabidopsis thaliana AT1G15360 D
ERF003 Arabidopsis thaliana AT5G25190 D
Bostr.29827s0297 Boechera stricta Bostr.29827s0297 I
Bostr.7128s0149 Boechera stricta Bostr.7128s0149 I
BRADI1G36590 Brachypodium distachyon BRADI1G36590 I
BRADI1G47480 Brachypodium distachyon BRADI1G47480 I
BRADI3G07450 Brachypodium distachyon BRADI3G07450 I
BRADI3G54160 Brachypodium distachyon BRADI3G54160 I
BRADI5G24710 Brachypodium distachyon BRADI5G24710 I
BRADI5G24720 Brachypodium distachyon BRADI5G24720 I
Bo00615s260 Brassica oleracea Bo00615s260 I
Bo2g158960 Brassica oleracea Bo2g158960 I
Bo7g096180 Brassica oleracea Bo7g096180 I
Bo8g066410 Brassica oleracea Bo8g066410 I
Bo8g106100 Brassica oleracea Bo8g106100 I
Bo9g011440 Brassica oleracea Bo9g011440 I
Bra009824 Brassica rapa Bra009824 I
Bra016663 Brassica rapa Bra016663 I
Bra020490 Brassica rapa Bra020490 I
Bra026140 Brassica rapa Bra026140 I
Bra036536 Brassica rapa Bra036536 I
PK28394.1 Cannabis sativa PK28394.1 I
Cagra.1945s0014 Capsella grandiflora Cagra.1945s0014 I
Cagra.2238s0086 Capsella grandiflora Cagra.2238s0086 I
Carubv10001796m.g Capsella rubella Carubv10001796m.g I
Carubv10010317m.g Capsella rubella Carubv10010317m.g I
evm.TU.supercontig_10.113 Carica papaya evm.TU.supercontig_10.113 I
evm.TU.supercontig_10.254 Carica papaya evm.TU.supercontig_10.254 I
evm.TU.supercontig_127.4 Carica papaya evm.TU.supercontig_127.4 I
Ca_01729 Cicer arietinum Ca_01729 I
Ca_02880 Cicer arietinum Ca_02880 I
Ca_06673 Cicer arietinum Ca_06673 I
Ca_09076 Cicer arietinum Ca_09076 I
Ca_13435 Cicer arietinum Ca_13435 I
Ca_20050 Cicer arietinum Ca_20050 I
Cla006213 Citrullus lanatus Cla006213 I
Cla012435 Citrullus lanatus Cla012435 I
Cla012914 Citrullus lanatus Cla012914 I
Cla012931 Citrullus lanatus Cla012931 I
Cla015579 Citrullus lanatus Cla015579 I
Cla016967 Citrullus lanatus Cla016967 I
Cla021283 Citrullus lanatus Cla021283 I
Cla021320 Citrullus lanatus Cla021320 I
Cla022694 Citrullus lanatus Cla022694 I
Cla022695 Citrullus lanatus Cla022695 I
Ciclev10009447m.g Citrus clementina Ciclev10009447m.g I
Ciclev10009593m.g Citrus clementina Ciclev10009593m.g I
Ciclev10026602m.g Citrus clementina Ciclev10026602m.g I
Ciclev10027305m.g Citrus clementina Ciclev10027305m.g I
orange1.1g027896m.g Citrus sinensis orange1.1g027896m.g I
orange1.1g029507m.g Citrus sinensis orange1.1g029507m.g I
orange1.1g030482m.g Citrus sinensis orange1.1g030482m.g I
Cucsa.096220 Cucumis sativus Cucsa.096220 I
Cucsa.105830 Cucumis sativus Cucsa.105830 I
Cucsa.132120 Cucumis sativus Cucsa.132120 I
Cucsa.162710 Cucumis sativus Cucsa.162710 I
Cucsa.162720 Cucumis sativus Cucsa.162720 I
Cucsa.271720 Cucumis sativus Cucsa.271720 I
Cucsa.292670 Cucumis sativus Cucsa.292670 I
Cucsa.310360 Cucumis sativus Cucsa.310360 I
Eucgr.C01178 Eucalyptus grandis Eucgr.C01178 I
Eucgr.C02719 Eucalyptus grandis Eucgr.C02719 I
Eucgr.C04221 Eucalyptus grandis Eucgr.C04221 I
Eucgr.F03947 Eucalyptus grandis Eucgr.F03947 I
Thhalv10004973m.g Eutrema salsugineum Thhalv10004973m.g I
Thhalv10008845m.g Eutrema salsugineum Thhalv10008845m.g I
Thhalv10015363m.g Eutrema salsugineum Thhalv10015363m.g I
gene15036-v1.0-hybrid Fragaria vesca gene15036-v1.0-hybrid I
gene15940-v1.0-hybrid Fragaria vesca gene15940-v1.0-hybrid I
GLYMA04G06690 Glycine max GLYMA04G06690 I
GLYMA04G19650 Glycine max GLYMA04G19650 I
GLYMA06G06780 Glycine max GLYMA06G06780 I
GLYMA06G29110 Glycine max GLYMA06G29110 I
GLYMA07G02930 Glycine max GLYMA07G02930 I
GLYMA08G22590 Glycine max GLYMA08G22590 I
GLYMA08G23160 Glycine max GLYMA08G23160 I
GLYMA13G23570 Glycine max GLYMA13G23570 I
GLYMA13G44660 Glycine max GLYMA13G44660 I
GLYMA14G13470 Glycine max GLYMA14G13470 I
GLYMA15G00660 Glycine max GLYMA15G00660 I
GLYMA15G01140 Glycine max GLYMA15G01140 I
GLYMA17G12330 Glycine max GLYMA17G12330 I
GLYMA17G33075 Glycine max GLYMA17G33075 I
Gorai.001G036500 Gossypium raimondii Gorai.001G036500 I
Gorai.001G042300 Gossypium raimondii Gorai.001G042300 I
Gorai.009G017500 Gossypium raimondii Gorai.009G017500 I
Gorai.009G060600 Gossypium raimondii Gorai.009G060600 I
Gorai.009G125100 Gossypium raimondii Gorai.009G125100 I
Gorai.010G117500 Gossypium raimondii Gorai.010G117500 I
Gorai.010G222900 Gossypium raimondii Gorai.010G222900 I
MLOC_12747 Hordeum vulgare MLOC_12747 I
MLOC_55323 Hordeum vulgare MLOC_55323 I
MLOC_59305 Hordeum vulgare MLOC_59305 I
MLOC_6403 Hordeum vulgare MLOC_6403 I
LPERR02G06710 Leersia perrieri LPERR02G06710 I
LPERR02G29600 Leersia perrieri LPERR02G29600 I
LPERR04G23560 Leersia perrieri LPERR04G23560 I
LPERR06G04830 Leersia perrieri LPERR06G04830 I
LPERR06G17010 Leersia perrieri LPERR06G17010 I
Lus10005343.g Linum usitatissimum Lus10005343.g I
Lus10005716.g Linum usitatissimum Lus10005716.g I
Lus10009480.g Linum usitatissimum Lus10009480.g I
Lus10016815.g Linum usitatissimum Lus10016815.g I
Lus10030097.g Linum usitatissimum Lus10030097.g I
Lus10035859.g Linum usitatissimum Lus10035859.g I
Lus10041023.g Linum usitatissimum Lus10041023.g I
Lus10041614.g Linum usitatissimum Lus10041614.g I
chr1.LjT03I11.120.nd Lotus japonicus chr1.LjT03I11.120.nd I
chr4.LjT07P17.60.nc Lotus japonicus chr4.LjT07P17.60.nc I
LjSGA_040388.1 Lotus japonicus LjSGA_040388.1 I
LjSGA_107677.3 Lotus japonicus LjSGA_107677.3 I
LjT09F21.30.nc Lotus japonicus LjT09F21.30.nc I
MDP0000124316 Malus domestica MDP0000124316 I
MDP0000127054 Malus domestica MDP0000127054 I
MDP0000172065 Malus domestica MDP0000172065 I
MDP0000243375 Malus domestica MDP0000243375 I
MDP0000279733 Malus domestica MDP0000279733 I
MDP0000290880 Malus domestica MDP0000290880 I
MDP0000297646 Malus domestica MDP0000297646 I
MDP0000430870 Malus domestica MDP0000430870 I
MDP0000873258 Malus domestica MDP0000873258 I
cassava11389.m1 Manihot esculenta cassava11389.m1 I
cassava20662.m1 Manihot esculenta cassava20662.m1 I
cassava24223.valid.m1 Manihot esculenta cassava24223.valid.m1 I
cassava26230.m1 Manihot esculenta cassava26230.m1 I
cassava34153.m1 Manihot esculenta cassava34153.m1 I
cassava38443.m1 Manihot esculenta cassava38443.m1 I
cassava38444.m1 Manihot esculenta cassava38444.m1 I
cassava8560.m1 Manihot esculenta cassava8560.m1 I
MTR_1g090170 Medicago truncatula MTR_1g090170 I
MTR_2g103700 Medicago truncatula MTR_2g103700 I
MTR_3g106290 Medicago truncatula MTR_3g106290 I
MTR_4g008860 Medicago truncatula MTR_4g008860 I
MTR_4g010640 Medicago truncatula MTR_4g010640 I
MTR_4g114570 Medicago truncatula MTR_4g114570 I
mg019221m Mimulus guttatus mg019221m I
mgf005189m Mimulus guttatus mgf005189m I
GSMUA_Achr10G24170_001 Musa acuminata GSMUA_Achr10G24170_001 I
GSMUA_Achr10G27000_001 Musa acuminata GSMUA_Achr10G27000_001 I
GSMUA_Achr4G02200_001 Musa acuminata GSMUA_Achr4G02200_001 I
GSMUA_Achr5G22840_001 Musa acuminata GSMUA_Achr5G22840_001 I
GSMUA_Achr6G05210_001 Musa acuminata GSMUA_Achr6G05210_001 I
GSMUA_Achr7G10160_001 Musa acuminata GSMUA_Achr7G10160_001 I
GSMUA_Achr7G16060_001 Musa acuminata GSMUA_Achr7G16060_001 I
GSMUA_Achr7G19320_001 Musa acuminata GSMUA_Achr7G19320_001 I
GSMUA_Achr9G13760_001 Musa acuminata GSMUA_Achr9G13760_001 I
GSMUA_Achr9G28540_001 Musa acuminata GSMUA_Achr9G28540_001 I
OBART02G07740 Oryza barthii OBART02G07740 I
OBART02G35950 Oryza barthii OBART02G35950 I
OBART04G27970 Oryza barthii OBART04G27970 I
OBART06G05300 Oryza barthii OBART06G05300 I
OBART06G20370 Oryza barthii OBART06G20370 I
OB02G17060 Oryza brachyantha OB02G17060 I
OB02G42740 Oryza brachyantha OB02G42740 I
OB04G34960 Oryza brachyantha OB04G34960 I
OB06G14850 Oryza brachyantha OB06G14850 I
OB06G28040 Oryza brachyantha OB06G28040 I
ORGLA02G0073000 Oryza glaberrima ORGLA02G0073000 I
ORGLA02G0312200 Oryza glaberrima ORGLA02G0312200 I
ORGLA04G0242300 Oryza glaberrima ORGLA04G0242300 I
ORGLA06G0167900 Oryza glaberrima ORGLA06G0167900 I
OGLUM02G07820 Oryza glumaepatula OGLUM02G07820 I
OGLUM02G37170 Oryza glumaepatula OGLUM02G37170 I
OGLUM04G27860 Oryza glumaepatula OGLUM04G27860 I
OGLUM06G05450 Oryza glumaepatula OGLUM06G05450 I
OGLUM06G21440 Oryza glumaepatula OGLUM06G21440 I
BGIOSGA005433 Oryza indica BGIOSGA005433 I
BGIOSGA007748 Oryza indica BGIOSGA007748 I
BGIOSGA014193 Oryza indica BGIOSGA014193 I
BGIOSGA014194 Oryza indica BGIOSGA014194 I
BGIOSGA020923 Oryza indica BGIOSGA020923 I
BGIOSGA022427 Oryza indica BGIOSGA022427 I
OLONG_004398 Oryza longistaminata OLONG_004398 I
OLONG_005458 Oryza longistaminata OLONG_005458 I
OLONG_016936 Oryza longistaminata OLONG_016936 I
OMERI02G33910 Oryza meridionalis OMERI02G33910 I
OMERI04G23370 Oryza meridionalis OMERI04G23370 I
OMERI06G06320 Oryza meridionalis OMERI06G06320 I
OMERI06G20980 Oryza meridionalis OMERI06G20980 I
ONIVA02G09300 Oryza nivara ONIVA02G09300 I
ONIVA02G37990 Oryza nivara ONIVA02G37990 I
ONIVA04G26640 Oryza nivara ONIVA04G26640 I
ONIVA06G06080 Oryza nivara ONIVA06G06080 I
ONIVA06G24150 Oryza nivara ONIVA06G24150 I
OPUNC02G06960 Oryza punctata OPUNC02G06960 I
OPUNC04G25430 Oryza punctata OPUNC04G25430 I
OPUNC06G05070 Oryza punctata OPUNC06G05070 I
OPUNC06G18570 Oryza punctata OPUNC06G18570 I
ORUFI03G26280 Oryza rufipogon ORUFI03G26280 I
ORUFI04G29600 Oryza rufipogon ORUFI04G29600 I
ORUFI06G05350 Oryza rufipogon ORUFI06G05350 I
ORUFI06G21790 Oryza rufipogon ORUFI06G21790 I
OS02G0202000 Oryza sativa OS02G0202000 I
OS02G0797100 Oryza sativa OS02G0797100 I
OS06G0181700 Oryza sativa OS06G0181700 I
OS06G0604000 Oryza sativa OS06G0604000 I
Pavir.Aa00196 Panicum virgatum Pavir.Aa00196 I
Pavir.Aa02977 Panicum virgatum Pavir.Aa02977 I
Pavir.Ab00737 Panicum virgatum Pavir.Ab00737 I
Pavir.Da00422 Panicum virgatum Pavir.Da00422 I
Pavir.Da02059 Panicum virgatum Pavir.Da02059 I
Pavir.Db01224 Panicum virgatum Pavir.Db01224 I
Pavir.Ga00062 Panicum virgatum Pavir.Ga00062 I
Pavir.J12977 Panicum virgatum Pavir.J12977 I
Pavir.J20772 Panicum virgatum Pavir.J20772 I
PDK_20s1355821g002 Phoenix dactylifera PDK_20s1355821g002 I
estExt_gwp_gw1.C_580005 Physcomitrella patens estExt_gwp_gw1.C_580005 I
gw1.21.122.1 Physcomitrella patens gw1.21.122.1 I
POPTR_0001s14720 Populus trichocarpa POPTR_0001s14720 I
SHN1 Populus trichocarpa POPTR_0003s02750 I
POPTR_0003s17830 Populus trichocarpa POPTR_0003s17830 I
POPTR_0006s27710 Populus trichocarpa POPTR_0006s27710 I
POPTR_0017s08250 Populus trichocarpa POPTR_0017s08250 I
POPTR_0018s02280 Populus trichocarpa POPTR_0018s02280 I
POPTR_0018s13130 Populus trichocarpa POPTR_0018s13130 I
Pm005717 Prunus mume Pm005717 I
Pm013752 Prunus mume Pm013752 I
Pm027542 Prunus mume Pm027542 I
PRUPE_ppa010601mg Prunus persica PRUPE_ppa010601mg I
PRUPE_ppa011795mg Prunus persica PRUPE_ppa011795mg I
PRUPE_ppa016477mg Prunus persica PRUPE_ppa016477mg I
PRUPE_ppa024826mg Prunus persica PRUPE_ppa024826mg I
28320.m001139 Ricinus communis 28320.m001139 I
29588.m000873 Ricinus communis 29588.m000873 I
29841.m002846 Ricinus communis 29841.m002846 I
29848.m004566 Ricinus communis 29848.m004566 I
SapurV1A.0034s0630 Salix purpurea SapurV1A.0034s0630 I
SapurV1A.0199s0350 Salix purpurea SapurV1A.0199s0350 I
SapurV1A.0280s0090 Salix purpurea SapurV1A.0280s0090 I
SapurV1A.0705s0080 Salix purpurea SapurV1A.0705s0080 I
SapurV1A.0730s0010 Salix purpurea SapurV1A.0730s0010 I
SapurV1A.0835s0060 Salix purpurea SapurV1A.0835s0060 I
SapurV1A.1759s0040 Salix purpurea SapurV1A.1759s0040 I
SapurV1A.2028s0010 Salix purpurea SapurV1A.2028s0010 I
SELMODRAFT_15839 Selaginella moellendorffii SELMODRAFT_15839 I
SELMODRAFT_73160 Selaginella moellendorffii SELMODRAFT_73160 I
SELMODRAFT_92334 Selaginella moellendorffii SELMODRAFT_92334 I
Si007359m.g Setaria italica Si007359m.g I
Si008394m.g Setaria italica Si008394m.g I
Si018550m.g Setaria italica Si018550m.g I
Si024352m.g Setaria italica Si024352m.g I
Solyc03g116610.2 Solanum lycopersicum Solyc03g116610.2 I
Solyc03g117130.2 Solanum lycopersicum Solyc03g117130.2 I
Solyc06g065820.2 Solanum lycopersicum Solyc06g065820.2 I
Solyc06g068360.2 Solanum lycopersicum Solyc06g068360.2 I
Solyc12g009490.1 Solanum lycopersicum Solyc12g009490.1 I
PGSC0003DMG400000636 Solanum tuberosum PGSC0003DMG400000636 I
PGSC0003DMG400002889 Solanum tuberosum PGSC0003DMG400002889 I
PGSC0003DMG400014127 Solanum tuberosum PGSC0003DMG400014127 I
PGSC0003DMG400014196 Solanum tuberosum PGSC0003DMG400014196 I
PGSC0003DMG400026136 Solanum tuberosum PGSC0003DMG400026136 I
PGSC0003DMG400028500 Solanum tuberosum PGSC0003DMG400028500 I
Sb04g006970 Sorghum bicolor Sb04g006970 I
Sb04g036020 Sorghum bicolor Sb04g036020 I
Sb06g031230 Sorghum bicolor Sb06g031230 I
Sb10g005520 Sorghum bicolor Sb10g005520 I
Sb10g023600 Sorghum bicolor Sb10g023600 I
TCM_027157 Theobroma cacao TCM_027157 I
TCM_027394 Theobroma cacao TCM_027394 I
TCM_036933 Theobroma cacao TCM_036933 I
TCM_038081 Theobroma cacao TCM_038081 I
Traes_2AL_61DB73424 Triticum aestivum Traes_2AL_61DB73424 I
Traes_2BL_5BA37F95E Triticum aestivum Traes_2BL_5BA37F95E I
Traes_2DL_CB03F0D2A Triticum aestivum Traes_2DL_CB03F0D2A I
TRAES3BF176500010CFD_g Triticum aestivum TRAES3BF176500010CFD_g I
Traes_6AS_8E7166D79 Triticum aestivum Traes_6AS_8E7166D79 I
Traes_6DL_31D678054 Triticum aestivum Traes_6DL_31D678054 I
Traes_6DS_E6A0BE6CD Triticum aestivum Traes_6DS_E6A0BE6CD I
Traes_7AS_89D49F177 Triticum aestivum Traes_7AS_89D49F177 I
Traes_7BL_EB1DCAB4B Triticum aestivum Traes_7BL_EB1DCAB4B I
Traes_7BS_51188D64E Triticum aestivum Traes_7BS_51188D64E I
Traes_7DL_E1D7A51C8 Triticum aestivum Traes_7DL_E1D7A51C8 I
Traes_7DS_433704E8E1 Triticum aestivum Traes_7DS_433704E8E1 I
Traes_7DS_433704E8E Triticum aestivum Traes_7DS_433704E8E I
TRIUR3_22374 Triticum urartu TRIUR3_22374 I
TRIUR3_25005 Triticum urartu TRIUR3_25005 I
VIT_04s0008g06000 Vitis vinifera VIT_04s0008g06000 I
SHN1 Vitis vinifera VIT_09s0002g06750 I
VIT_09s0002g09120 Vitis vinifera VIT_09s0002g09120 I
VIT_09s0002g09140 Vitis vinifera VIT_09s0002g09140 I
VIT_11s0016g05340 Vitis vinifera VIT_11s0016g05340 I
GRMZM2G067463 Zea mays GRMZM2G067463 I
GRMZM2G085678 Zea mays GRMZM2G085678 I
GRMZM2G104260 Zea mays GRMZM2G104260 I
GRMZM2G106591 Zea mays GRMZM2G106591 I
GRMZM2G111415 Zea mays GRMZM2G111415 I
GRMZM2G135452 Zea mays GRMZM2G135452 I
GRMZM2G156006 Zea mays GRMZM2G156006 I