ECPE_0000615101 (Echinostoma caproni)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 ECPE_0000615101 T153274_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.760 0.783
Sp1
M03682_2.00 		Drosophila melanogaster
HNGCCACGCCCARK
MYTGGGCGTGGCND		 SELEX
Nitta et al.(2015)
Sp1_1 		0.760 0.783
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.760 0.783
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.760 0.783
Sp1
M06117_2.00 		Drosophila melanogaster
DHYMCGCCCMY
RKGGGCGKRDH		 B1H
Zhu et al.(2011)
Sp1_SANGER_5_FBgn0020378 		0.760 0.783
Sp1
M06118_2.00 		Drosophila melanogaster
NKHHMCGCCCMYNN
NNRKGGGCGKDDMN		 B1H
Zhu et al.(2011)
Sp1_SOLEXA_2.5_FBgn0020378 		0.760 0.783
Sp5
M09016_2.00 		Mus musculus
CYCCKCCYHYHBCYYHBYYYHYHB
VDRDRRRVDRRGVDRDRGGMGGRG		 Misc
Kulakovskiy et al.(2013)
SP5_MOUSE.H11MO.0.C 		0.760 0.783
SP5
M10319_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP5_Q2 		0.760 0.783
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.760 0.783
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.760 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ECPE_0000615101-mRNA-1 C2H2 ZF 414 436
ECPE_0000615101-mRNA-1 C2H2 ZF 442 466
ECPE_0000615101-mRNA-1 C2H2 ZF 472 494

Links

Other C2H2 ZF family TFs
Other Echinostoma caproni TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CAGL0K09372g Candida glabrata CAGL0K09372g I
KAFR_0I02370 Kazachstania africana KAFR_0I02370 I
NCAS_0E00610 Naumovozyma castellii NCAS_0E00610 I
NDAI_0I02900 Naumovozyma dairenensis NDAI_0I02900 I
6354_YER028C Saccharomyces bayanus 6354_YER028C I
Scas_Contig712.42 Saccharomyces castellii Scas_Contig712.42 I
MIG3 Saccharomyces cerevisiae YER028C D
MIG2 Saccharomyces cerevisiae YGL209W D
SKUD_125302 Saccharomyces kudriavzevii SKUD_125302 I
SKUD_175702 Saccharomyces kudriavzevii SKUD_175702 I
7028_YGL209W Saccharomyces mikatae 7028_YGL209W I
7577_YGL209W Saccharomyces paradoxus 7577_YGL209W I
TBLA_0C04880 Tetrapisispora blattae TBLA_0C04880 I
TPHA_0D03400 Tetrapisispora phaffii TPHA_0D03400 I
TDEL_0D05860 Torulaspora delbrueckii TDEL_0D05860 I
ZYRO0E08426g Zygosaccharomyces rouxii ZYRO0E08426g I