MIG3 (Saccharomyces cerevisiae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 YER028C T131833_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MIG3
M00023_2.00		 Saccharomyces cerevisiae
NNCCCCGCAH
DTGCGGGGNN		 PBM
Badis et al.(2008)
MIG3_2054		 (Direct) (Direct)
MIG3
M01529_2.00		 Saccharomyces cerevisiae
CYCCRBNNN
NNNVYGGRG		 PBM
Zhu et al.(2009)
Mig3		 (Direct) (Direct)
MIG3
M07453_2.00		 Saccharomyces cerevisiae
CCCCRCN
NGYGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0339.1		 (Direct) (Direct)
MIG3
M08520_2.00		 Saccharomyces cerevisiae
CCCCRCN
NGYGGGG		 Misc
DeBoer et al.(2011)
YER028C_501		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MIG2
M00027_2.00 		Saccharomyces cerevisiae
NNCCCCRBNN
NNVYGGGGNN		 PBM
Badis et al.(2008)
MIG2_2053 		0.787 0.826
MIG2
M01533_2.00 		Saccharomyces cerevisiae
NNCCCCRCNN
NNGYGGGGNN		 PBM
Zhu et al.(2009)
Mig2 		0.787 0.826
MIG2
M07457_2.00 		Saccharomyces cerevisiae
CCCCRCN
NGYGGGG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0338.1 		0.787 0.826
MIG2
M08525_2.00 		Saccharomyces cerevisiae
CCCCRCN
NGYGGGG		 Misc
DeBoer et al.(2011)
YGL209W_523 		0.787 0.826
MIG2
M10394_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MIG2_02 		0.787 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M00023_2.00 C2H2 ZF 16 38
M00023_2.00 C2H2 ZF 44 68
M01529_2.00 C2H2 ZF 17 39
M01529_2.00 C2H2 ZF 45 69

DNA Binding Domains

Protein ID Domain From To Sequence
YER028C C2H2 ZF 17 39
YER028C C2H2 ZF 45 69

Links

Other C2H2 ZF family TFs
Other Saccharomyces cerevisiae TFs

21 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZYRO0E08426g Zygosaccharomyces rouxii ZYRO0E08426g I 0.822
SKUD_175702 Saccharomyces kudriavzevii SKUD_175702 I 0.816
TBLA_0C04880 Tetrapisispora blattae TBLA_0C04880 I 0.798
KAFR_0I02370 Kazachstania africana KAFR_0I02370 I 0.797
NCAS_0E00610 Naumovozyma castellii NCAS_0E00610 I 0.792
Scas_Contig712.42 Saccharomyces castellii Scas_Contig712.42 I 0.792
SKUD_125302 Saccharomyces kudriavzevii SKUD_125302 I 0.787
MIG2 Saccharomyces cerevisiae YGL209W D 0.787
7028_YGL209W Saccharomyces mikatae 7028_YGL209W I 0.787
7577_YGL209W Saccharomyces paradoxus 7577_YGL209W I 0.787
8566_YGL209W Saccharomyces bayanus 8566_YGL209W I 0.787
CAGL0C02519g Candida glabrata CAGL0C02519g I 0.786
5988_YER028C Saccharomyces mikatae 5988_YER028C I 0.786
CAGL0K09372g Candida glabrata CAGL0K09372g I 0.768
6354_YER028C Saccharomyces bayanus 6354_YER028C I 0.768
TDEL_0D05860 Torulaspora delbrueckii TDEL_0D05860 I 0.767
KNAG_0B00590 Kazachstania naganishii KNAG_0B00590 I 0.763
NDAI_0I02900 Naumovozyma dairenensis NDAI_0I02900 I 0.763
ZBAI_04666 Zygosaccharomyces bailii ZBAI_04666 I 0.763
ZBAI_06707 Zygosaccharomyces bailii ZBAI_06707 I 0.763
Kpol_423p15 Vanderwaltozyma polyspora Kpol_423p15 I 0.759