CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KNAG_0B00590
(
Kazachstania naganishii
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
KNAG_0B00590
T120728_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MIG3
M00023_2.00
Saccharomyces cerevisiae
NNCCCCGCAH
DTGCGGGGNN
PBM
Badis et al.(2008)
MIG3_2054
0.763
0.826
MIG3
M01529_2.00
Saccharomyces cerevisiae
CYCCRBNNN
NNNVYGGRG
PBM
Zhu et al.(2009)
Mig3
0.763
0.826
MIG3
M07453_2.00
Saccharomyces cerevisiae
CCCCRCN
NGYGGGG
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0339.1
0.763
0.826
MIG3
M08520_2.00
Saccharomyces cerevisiae
CCCCRCN
NGYGGGG
Misc
DeBoer et al.(2011)
YER028C_501
0.763
0.826
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCK68507
C2H2 ZF
20
42
YKCGICSRGFHRLEHKKRHLRTH
CCK68507
C2H2 ZF
48
72
HKCVFPGCTKGFSRGDELKRHLRTH
Links
Other
C2H2 ZF
family TFs
Other
Kazachstania naganishii
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
5988_YER028C
Saccharomyces mikatae
5988_YER028C
I
0.787
TBLA_0C04880
Tetrapisispora blattae
TBLA_0C04880
I
0.768
MIG3
Saccharomyces cerevisiae
YER028C
D
0.763
ZYRO0E08426g
Zygosaccharomyces rouxii
ZYRO0E08426g
I
0.763
CAGL0C02519g
Candida glabrata
CAGL0C02519g
I
0.757
CAGL0K09372g
Candida glabrata
CAGL0K09372g
I
0.757
NDAI_0I02900
Naumovozyma dairenensis
NDAI_0I02900
I
0.757
SKUD_175702
Saccharomyces kudriavzevii
SKUD_175702
I
0.757
6354_YER028C
Saccharomyces bayanus
6354_YER028C
I
0.757
KNAG_0E01600
Kazachstania naganishii
KNAG_0E01600
N
0.756