genemark-nMf.1.1.scaf15253-processed-gene-0.1 (Meloidogyne floridensis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 genemark-nMf.1.1.scaf15253-processed-gene-0.1 T153539_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf15253-processed-gene-0.1-mRNA-1 C2H2 ZF 98 118
genemark-nMf.1.1.scaf15253-processed-gene-0.1-mRNA-1 C2H2 ZF 126 148
genemark-nMf.1.1.scaf15253-processed-gene-0.1-mRNA-1 C2H2 ZF 153 174
genemark-nMf.1.1.scaf15253-processed-gene-0.1-mRNA-1 C2H2 ZF 180 202

Links

Other C2H2 ZF family TFs
Other Meloidogyne floridensis TFs

2 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCDUO_00938 Ancylostoma duodenale ANCDUO_00938 N
Bm7577 Brugia malayi Bm7577 I
CGOC_0000024901 Cylicostephanus goldi CGOC_0000024901 N
HPBE_0001786001 Heligmosomoides bakeri HPBE_0001786001 N
genemark-nMf.1.1.scaf21811-processed-gene-0.1 Meloidogyne floridensis genemark-nMf.1.1.scaf21811-processed-gene-0.1 N
MhA1_Contig1079.frz3.fgene1 Meloidogyne hapla MhA1_Contig1079.frz3.fgene1 N
Minc14444 Meloidogyne incognita Minc14444 N
PTRK_0001387500 Parastrongyloides trichosuri PTRK_0001387500 N
SSTP_0000891500 Strongyloides stercoralis SSTP_0000891500 N
SVE_1047000 Strongyloides venezuelensis SVE_1047000 N
D917_09267 Trichinella nativa D917_09267 N
EFV59452 Trichinella spiralis EFV59452 N
EFV59481 Trichinella spiralis EFV59481 N
TMUE_s0005013100 Trichuris muris TMUE_s0005013100 N
D918_09500 Trichuris suis D918_09500 N
TTRE_0000192401 Trichuris trichiura TTRE_0000192401 N