PXEA_0003135501 (Protopolystoma xenopodis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 PXEA_0003135501 T155854_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00 		Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1 		0.774 0.798
gl
M06078_2.00 		Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618 		0.774 0.798
gl
M06079_2.00 		Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618 		0.774 0.798
gl
M06080_2.00 		Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618 		0.774 0.798
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PXEA_0003135501-mRNA-1 C2H2 ZF 452 473
PXEA_0003135501-mRNA-1 C2H2 ZF 479 501
PXEA_0003135501-mRNA-1 C2H2 ZF 507 529
PXEA_0003135501-mRNA-1 C2H2 ZF 535 557
PXEA_0003135501-mRNA-1 C2H2 ZF 563 585

Links

Other C2H2 ZF family TFs
Other Protopolystoma xenopodis TFs

44 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI008619 Acyrthosiphon pisum ACYPI008619 I 0.774
AATE012213 Anopheles atroparvus AATE012213 I 0.776
ACUA005738 Anopheles culicifacies ACUA005738 I 0.776
ADAC004790 Anopheles darlingi ADAC004790 I 0.772
AFAF008430 Anopheles farauti AFAF008430 I 0.776
AFUN002458 Anopheles funestus AFUN002458 I 0.776
AGAP004331 Anopheles gambiae AGAP004331 I 0.776
AMAM014008 Anopheles maculatus AMAM014008 I 0.776
GB43258 Apis mellifera GB43258 I 0.776
ACEP21757 Atta cephalotes ACEP21757 I 0.776
BGLB012448 Biomphalaria glabrata BGLB012448 I 0.774
CapteG4919 Capitella teleta CapteG4919 I 0.774
CLEC000700 Cimex lectularius CLEC000700 I 0.774
CGI_10011936 Crassostrea gigas CGI_10011936 I 0.783
CpipJ_CPIJ006366 Culex pipiens CpipJ_CPIJ006366 I 0.766
CPIJ006366 Culex quinquefasciatus CPIJ006366 I 0.766
KGM_06609 Danaus plexippus KGM_06609 I 0.764
YQE_07567 Dendroctonus ponderosae YQE_07567 I 0.764
GF18117 Drosophila ananassae FBgn0095135 I 0.774
GG16477 Drosophila erecta FBgn0108708 I 0.774
GH19229 Drosophila grimshawi FBgn0126695 I 0.774
gl Drosophila melanogaster FBgn0004618 D 0.774
GI24263 Drosophila mojavensis FBgn0146986 I 0.774
GL23194 Drosophila persimilis FBgn0160784 I 0.774
GA20515 Drosophila pseudoobscura FBgn0080509 I 0.774
GM18708 Drosophila sechellia FBgn0173613 I 0.774
GD20175 Drosophila simulans FBgn0191653 I 0.774
gl Drosophila virilis FBgn0015211 I 0.774
GK11495 Drosophila willistoni FBgn0213506 I 0.774
GE25205 Drosophila yakuba FBgn0242289 I 0.774
HMEL016965 Heliconius melpomene HMEL016965 I 0.764
HelroG86767 Helobdella robusta HelroG86767 I 0.764
ISCW013678 Ixodes scapularis ISCW013678 I 0.783
LotgiG155751 Lottia gigantea LotgiG155751 I 0.774
LCUP002895 Lucilia cuprina LCUP002895 I 0.774
MCINX014711 Melitaea cinxia MCINX014711 I 0.760
MDOA012721 Musca domestica MDOA012721 I 0.774
NV10631 Nasonia vitripennis NV10631 I 0.776
Ocbimv22030200m.g Octopus bimaculoides Ocbimv22030200m.g I 0.774
PHUM530160 Pediculus humanus PHUM530160 I 0.774
Sakowv30008117m.g Saccoglossus kowalevskii Sakowv30008117m.g I 0.762
SMAR000758 Strigamia maritima SMAR000758 I 0.772
tetur07g01570 Tetranychus urticae tetur07g01570 I 0.768
TC012565 Tribolium castaneum TC012565 I 0.764