CGI_10011936 (Crassostrea gigas)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 CGI_10011936 T083478_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gl
M03671_2.00 		Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY		 SELEX
Nitta et al.(2015)
gl_1 		0.794 0.904
gl
M06078_2.00 		Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH		 B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618 		0.794 0.904
gl
M06079_2.00 		Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA		 B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618 		0.794 0.904
gl
M06080_2.00 		Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN		 B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618 		0.794 0.904
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EKC25221 C2H2 ZF 229 250
EKC25221 C2H2 ZF 256 278
EKC25221 C2H2 ZF 284 306
EKC25221 C2H2 ZF 312 334
EKC25221 C2H2 ZF 340 362

Links

Other C2H2 ZF family TFs
Other Crassostrea gigas TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGLB012448 Biomphalaria glabrata BGLB012448 I 0.813
Ocbimv22030200m.g Octopus bimaculoides Ocbimv22030200m.g I 0.803
CapteG4919 Capitella teleta CapteG4919 I 0.801
ISCW013678 Ixodes scapularis ISCW013678 I 0.801
LotgiG155751 Lottia gigantea LotgiG155751 I 0.801
PHUM530160 Pediculus humanus PHUM530160 I 0.801
CLEC000700 Cimex lectularius CLEC000700 I 0.801
ACEP21757 Atta cephalotes ACEP21757 I 0.799
GB43258 Apis mellifera GB43258 I 0.799
NV10631 Nasonia vitripennis NV10631 I 0.799
tetur07g01570 Tetranychus urticae tetur07g01570 I 0.797
AGAP004331 Anopheles gambiae AGAP004331 I 0.796
AATE012213 Anopheles atroparvus AATE012213 I 0.796
ACUA005738 Anopheles culicifacies ACUA005738 I 0.796
AFAF008430 Anopheles farauti AFAF008430 I 0.796
AFUN002458 Anopheles funestus AFUN002458 I 0.796
AMAM014008 Anopheles maculatus AMAM014008 I 0.796
gl Drosophila melanogaster FBgn0004618 D 0.794
gl Drosophila virilis FBgn0015211 I 0.794
GA20515 Drosophila pseudoobscura FBgn0080509 I 0.794
GF18117 Drosophila ananassae FBgn0095135 I 0.794
GG16477 Drosophila erecta FBgn0108708 I 0.794
GH19229 Drosophila grimshawi FBgn0126695 I 0.794
GI24263 Drosophila mojavensis FBgn0146986 I 0.794
GL23194 Drosophila persimilis FBgn0160784 I 0.794
GM18708 Drosophila sechellia FBgn0173613 I 0.794
GD20175 Drosophila simulans FBgn0191653 I 0.794
GK11495 Drosophila willistoni FBgn0213506 I 0.794
GE25205 Drosophila yakuba FBgn0242289 I 0.794
LCUP002895 Lucilia cuprina LCUP002895 I 0.794
MDOA012721 Musca domestica MDOA012721 I 0.794
SMAR000758 Strigamia maritima SMAR000758 I 0.793
ADAC004790 Anopheles darlingi ADAC004790 I 0.792
CpipJ_CPIJ006366 Culex pipiens CpipJ_CPIJ006366 I 0.790
ACYPI008619 Acyrthosiphon pisum ACYPI008619 I 0.790
CPIJ006366 Culex quinquefasciatus CPIJ006366 I 0.790
Sakowv30008117m.g Saccoglossus kowalevskii Sakowv30008117m.g I 0.790
HMEL016965 Heliconius melpomene HMEL016965 I 0.789
KGM_06609 Danaus plexippus KGM_06609 I 0.789
HelroG86767 Helobdella robusta HelroG86767 I 0.787
MCINX014711 Melitaea cinxia MCINX014711 I 0.785
YQE_07567 Dendroctonus ponderosae YQE_07567 I 0.784
PXEA_0003135501 Protopolystoma xenopodis PXEA_0003135501 I 0.783
TC012565 Tribolium castaneum TC012565 I 0.782
ML19062a Mnemiopsis leidyi ML19062a I 0.761
SPU_007599 Strongylocentrotus purpuratus SPU_007599 I 0.759