CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
ML19062a
(
Mnemiopsis leidyi
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
ML19062a
T123534_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gl
M03671_2.00
Drosophila melanogaster
RTTACCATACAAGTGCAV
BTGCACTTGTATGGTAAY
SELEX
Nitta et al.(2015)
gl_1
0.761
0.825
gl
M06078_2.00
Drosophila melanogaster
DAYNCWTBAAAT
ATTTVAWGNRTH
B1H
Zhu et al.(2011)
gl_FlyReg_FBgn0004618
0.761
0.825
gl
M06079_2.00
Drosophila melanogaster
TTRTABGGYTTC
GAARCCVTAYAA
B1H
Zhu et al.(2011)
gl_SANGER_5_FBgn0004618
0.761
0.825
gl
M06080_2.00
Drosophila melanogaster
NNBDWNTADGGCTTC
GAAGCCHTANWHVNN
B1H
Zhu et al.(2011)
gl_SOLEXA_5_FBgn0004618
0.761
0.825
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ML19062a-PA
C2H2 ZF
200
221
LCYLCGKTYARPSTLKTHMRTH
ML19062a-PA
C2H2 ZF
227
249
YKCDTCNKGFSQAANLTAHVRTH
ML19062a-PA
C2H2 ZF
255
277
FRCPVCDRRFSQSSSVTTHMRTH
ML19062a-PA
C2H2 ZF
283
305
YKCKVCHKAFSDTSTLTKHIRVH
ML19062a-PA
C2H2 ZF
311
333
YRCTVCHLRFSQSGNLNRHMRTH
Links
Other
C2H2 ZF
family TFs
Other
Mnemiopsis leidyi
TFs
38 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGLB012448
Biomphalaria glabrata
BGLB012448
I
0.773
HelroG86767
Helobdella robusta
HelroG86767
I
0.771
tetur07g01570
Tetranychus urticae
tetur07g01570
I
0.763
NV10631
Nasonia vitripennis
NV10631
I
0.761
PHUM530160
Pediculus humanus
PHUM530160
I
0.761
AMAM014008
Anopheles maculatus
AMAM014008
I
0.761
LotgiG155751
Lottia gigantea
LotgiG155751
I
0.761
AGAP004331
Anopheles gambiae
AGAP004331
I
0.761
ADAC004790
Anopheles darlingi
ADAC004790
I
0.761
AFUN002458
Anopheles funestus
AFUN002458
I
0.761
ACEP21757
Atta cephalotes
ACEP21757
I
0.761
LCUP002895
Lucilia cuprina
LCUP002895
I
0.761
AATE012213
Anopheles atroparvus
AATE012213
I
0.761
CLEC000700
Cimex lectularius
CLEC000700
I
0.761
Sakowv30008117m.g
Saccoglossus kowalevskii
Sakowv30008117m.g
I
0.761
Ocbimv22030200m.g
Octopus bimaculoides
Ocbimv22030200m.g
I
0.761
ACUA005738
Anopheles culicifacies
ACUA005738
I
0.761
GB43258
Apis mellifera
GB43258
I
0.761
GA20515
Drosophila pseudoobscura
FBgn0080509
I
0.761
GF18117
Drosophila ananassae
FBgn0095135
I
0.761
gl
Drosophila virilis
FBgn0015211
I
0.761
gl
Drosophila melanogaster
FBgn0004618
D
0.761
MDOA012721
Musca domestica
MDOA012721
I
0.761
CGI_10011936
Crassostrea gigas
CGI_10011936
I
0.761
GG16477
Drosophila erecta
FBgn0108708
I
0.761
GH19229
Drosophila grimshawi
FBgn0126695
I
0.761
GK11495
Drosophila willistoni
FBgn0213506
I
0.761
GE25205
Drosophila yakuba
FBgn0242289
I
0.761
GD20175
Drosophila simulans
FBgn0191653
I
0.761
GM18708
Drosophila sechellia
FBgn0173613
I
0.761
GI24263
Drosophila mojavensis
FBgn0146986
I
0.761
GL23194
Drosophila persimilis
FBgn0160784
I
0.761
AFAF008430
Anopheles farauti
AFAF008430
I
0.761
HMEL016965
Heliconius melpomene
HMEL016965
I
0.759
CapteG4919
Capitella teleta
CapteG4919
I
0.759
KGM_06609
Danaus plexippus
KGM_06609
I
0.759
MCINX014711
Melitaea cinxia
MCINX014711
I
0.759
SMAR000758
Strigamia maritima
SMAR000758
I
0.759