CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SSLN_0001230301
(
Schistocephalus solidus
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
SSLN_0001230301
T157179_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SSLN_0001230301-mRNA-1
C2H2 ZF
253
275
YQCDQCLKRYSGIKSLKNHKLTH
SSLN_0001230301-mRNA-1
C2H2 ZF
281
303
HKCSFCSKAFLRADKMRMHEISH
SSLN_0001230301-mRNA-1
C2H2 ZF
309
331
FECATCKQRFTRSDKLKIHHRTH
SSLN_0001230301-mRNA-1
C2H2 ZF
337
359
YACTFCPKRFTRSDKLKIHERIH
SSLN_0001230301-mRNA-1
C2H2 ZF
365
387
YECGHCGKCFARSDKRRLHERTH
Links
Other
C2H2 ZF
family TFs
Other
Schistocephalus solidus
TFs
10 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
csin101641
Clonorchis sinensis
csin101641
N
0.781
ECPE_0001401001
Echinostoma caproni
ECPE_0001401001
N
0.783
PXEA_0000554601
Protopolystoma xenopodis
PXEA_0000554601
N
0.781
SCUD_0000308501
Schistosoma curassoni
SCUD_0000308501
N
0.775
A_00063
Schistosoma haematobium
A_00063
N
0.775
Smp_152900
Schistosoma mansoni
Smp_152900
N
0.777
SMRZ_0001945501
Schistosoma margrebowiei
SMRZ_0001945501
N
0.775
SMTD_0002087901
Schistosoma mattheei
SMTD_0002087901
N
0.775
SROB_0001523701
Schistosoma rodhaini
SROB_0001523701
N
0.777
TRE_0000243101
Trichobilharzia regenti
TRE_0000243101
N
0.777