MhA1_Contig653.frz3.gene3 (Meloidogyne hapla)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 MhA1_Contig653.frz3.gene3 T159652_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig653.frz3.gene3 C2HC ZF 11 39

Links

Other C2HC ZF family TFs
Other Meloidogyne hapla TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_013_00407 Aquilegia coerulea Aquca_013_00407 N
fgenesh1_pg.C_scaffold_2000170 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000170 N
SCL28 Arabidopsis thaliana AT1G63100 N
Bostr.22157s0011 Boechera stricta Bostr.22157s0011 N
Bo00795s120 Brassica oleracea Bo00795s120 N
Bo9g028850 Brassica oleracea Bo9g028850 N
Bra026999 Brassica rapa Bra026999 N
Bra027620 Brassica rapa Bra027620 N
PK26305.1 Cannabis sativa PK26305.1 N
Cagra.9501s0015 Capsella grandiflora Cagra.9501s0015 N
Carubv10019945m.g Capsella rubella Carubv10019945m.g N
evm.TU.supercontig_74.80 Carica papaya evm.TU.supercontig_74.80 N
Ca_08738 Cicer arietinum Ca_08738 N
Cla004494 Citrullus lanatus Cla004494 N
Ciclev10019186m.g Citrus clementina Ciclev10019186m.g N
orange1.1g005954m.g Citrus sinensis orange1.1g005954m.g N
Cucsa.041620 Cucumis sativus Cucsa.041620 N
Eucgr.D01917 Eucalyptus grandis Eucgr.D01917 N
Thhalv10023324m.g Eutrema salsugineum Thhalv10023324m.g N
gene32389-v1.0-hybrid Fragaria vesca gene32389-v1.0-hybrid N
GLYMA05G03490 Glycine max GLYMA05G03490 N
GLYMA17G14030 Glycine max GLYMA17G14030 N
Gorai.008G243900 Gossypium raimondii Gorai.008G243900 N
Gorai.003G162400 Gossypium raimondii Gorai.003G162400 N
Lus10029592.g Linum usitatissimum Lus10029592.g N
Lus10006322.g Linum usitatissimum Lus10006322.g N
LjSGA_020116.2 Lotus japonicus LjSGA_020116.2 N
MDP0000243351 Malus domestica MDP0000243351 N
MDP0000915100 Malus domestica MDP0000915100 N
cassava41178.m1 Manihot esculenta cassava41178.m1 N
cassava2243.valid.m1 Manihot esculenta cassava2243.valid.m1 N
MTR_4g102790 Medicago truncatula MTR_4g102790 N
POPTR_0001s08850 Populus trichocarpa POPTR_0001s08850 N
POPTR_0003s12240 Populus trichocarpa POPTR_0003s12240 N
Pm023754 Prunus mume Pm023754 N
PRUPE_ppa017030mg Prunus persica PRUPE_ppa017030mg N
SapurV1A.0507s0230 Salix purpurea SapurV1A.0507s0230 N
SapurV1A.1081s0090 Salix purpurea SapurV1A.1081s0090 N
Solyc08g080400.1 Solanum lycopersicum Solyc08g080400.1 N
PGSC0003DMG400003047 Solanum tuberosum PGSC0003DMG400003047 N
TCM_016186 Theobroma cacao TCM_016186 N
VIT_02s0025g04000 Vitis vinifera VIT_02s0025g04000 N