CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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KDM2A
(
Taeniopygia guttata
)
CxxC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02008 (zf-CXXC)
IPR002857
ENSTGUG00000005980
T168348_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
KDM2A
M01915_2.00
Meleagris gallopavo
NNNNYRNNNN
NNNNYRNNNN
PBM
Weirauch et al.(2014)
pTH9212
0.979
0.979
FBXL19
M01916_2.00
Tetraodon nigroviridis
NNNNCGNN
NNCGNNNN
PBM
Weirauch et al.(2014)
pTH8570
0.809
0.809
kdm2ba
M01909_2.00
Danio rerio
NNNNCGN
NCGNNNN
PBM
Weirauch et al.(2014)
pTH8577
0.787
0.787
KDM2B
M01911_2.00
Homo sapiens
NNNNNNCGN
NCGNNNNNN
PBM
Weirauch et al.(2014)
pTH9191
0.787
0.787
A6H8I1_DANRE
M01906_2.00
Danio rerio
CGTACGYA
TRCGTACG
PBM
Weirauch et al.(2014)
pTH9257
0.766
0.766
kdm2aa
M01910_2.00
Danio rerio
NCGNNNNNN
NNNNNNCGN
PBM
Weirauch et al.(2014)
pTH8585
0.702
0.702
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTGUP00000006171
CxxC
563
609
GARRRRVRCRKCKACMQGECGMCHYCRDMKKFGGPGRMKQSCVLRQC
Links
Other
CxxC
family TFs
Other
Taeniopygia guttata
TFs
208 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_AFL160C
Ashbya gossypii
AGOS_AFL160C
N
AWRI1499_3090
Brettanomyces bruxellensis
AWRI1499_3090
I
CaO19.12798
Candida albicans
CaO19.12798
N
CaO19.5338
Candida albicans
CaO19.5338
N
CD36_24740
Candida dubliniensis
CD36_24740
N
PGUG_04835
Candida guilliermondii
PGUG_04835
I
CLUG_00203
Candida lusitaniae
CLUG_00203
I
G210_5810
Candida maltosa
G210_5810
N
CORT_0C07270
Candida orthopsilosis
CORT_0C07270
N
CPAG_02485
Candida parapsilosis
CPAG_02485
N
CANTEDRAFT_110774
Candida tenuis
CANTEDRAFT_110774
N
CTRG_01928
Candida tropicalis
CTRG_01928
N
CLUG_00203
Clavispora lusitaniae
CLUG_00203
I
DEHA2C11418g
Debaryomyces hansenii
DEHA2C11418g
N
DEHA2F03366g
Debaryomyces hansenii
DEHA2F03366g
I
PAS_FragB_0075
Komagataella pastoris
PAS_FragB_0075
I
KUCA_T00003059001
Kuraishia capsulata
KUCA_T00003059001
N
LELG_02329
Lodderomyces elongisporus
LELG_02329
N
PGUG_04835
Meyerozyma guilliermondii
PGUG_04835
I
GNLVRS01_PISO0F02711g
Millerozyma farinosa
GNLVRS01_PISO0F02711g
I
GNLVRS01_PISO0J02671g
Millerozyma farinosa
GNLVRS01_PISO0J02671g
I
GNLVRS01_PISO0E01698g
Millerozyma farinosa
GNLVRS01_PISO0E01698g
N
JL09_g5364
Pichia kudriavzevii
JL09_g5364
N
XP_002490850.1
Pichia pastoris
XP_002490850.1
I
e_gwh1.5.1.177.1
Pichia stipitis
e_gwh1.5.1.177.1
N
gwh1.6.1.1306.1
Pichia stipitis
gwh1.6.1.1306.1
N
AACERI_AaceriAFL160C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriAFL160C
N
PICST_46395
Scheffersomyces stipitis
PICST_46395
N
PICST_9952
Scheffersomyces stipitis
PICST_9952
N
SPAPADRAFT_137810
Spathaspora passalidarum
SPAPADRAFT_137810
N