CBN06605 (Caenorhabditis brenneri)
DM

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00751 (DM) IPR001275 CBN06605 T168907_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBN06605
M01925_2.00		 Caenorhabditis brenneri
NWGTWKN
NMWACWN		 PBM
Weirauch et al.(2014)
pTH9247		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CJA05633_CONSTRUCT
M01936_2.00 		PBM CONSTRUCTS
NWGTWDN
NHWACWN		 PBM
Weirauch et al.(2014)
pTH9344 		0.972 0.979
CBG09413
M01924_2.00 		Caenorhabditis briggsae
AATGTTTC
GAAACATT		 PBM
Weirauch et al.(2014)
pTH8330 		0.966 0.979
dmd-10
M00657_2.00 		Caenorhabditis elegans
AWTGTTTC
GAAACAWT		 PBM
Narasimhan et al.(2015)
pTH9142 		0.963 0.957
WUBG_11979
M01922_2.00 		Wuchereria bancrofti
ATGTWTCA
TGAWACAT		 PBM
Weirauch et al.(2014)
pTH9296 		0.950 0.851
Bm2567
M01923_2.00 		Brugia malayi
NNNWGTTKHN
NDMAACWNNN		 PBM
Weirauch et al.(2014)
pTH9246 		0.950 0.851
dmd-3
M00658_2.00 		Caenorhabditis elegans
NNWGTWDN
NHWACWNN		 PBM
Narasimhan et al.(2015)
pTH10638 		0.909 0.745
For this family, TFs with SR scores > 0.845 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01925_2.00 DM 36 82

DNA Binding Domains

Protein ID Domain From To Sequence
CBN06605 DM 36 82

Links

Other DM family TFs
Other Caenorhabditis brenneri TFs

47 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000015776 Ailuropoda melanoleuca ENSAMEG00000015776 I 0.000
ENSAMEG00000018305 Ailuropoda melanoleuca ENSAMEG00000018305 I 0.000
Alligator_sinensis_CCG014115.1 Alligator sinensis Alligator_sinensis_CCG014115.1 I 0.000
ENSAPLG00000010950 Anas platyrhynchos ENSAPLG00000010950 I 0.000
ANCCAN_23624 Ancylostoma caninum ANCCAN_23624 I 0.000
ANCCAN_24706 Ancylostoma caninum ANCCAN_24706 I 0.000
ANCCEY_02877 Ancylostoma ceylanicum ANCCEY_02877 I 0.000
ANCDUO_15205 Ancylostoma duodenale ANCDUO_15205 I 0.000
ACOC_0000703501 Angiostrongylus costaricensis ACOC_0000703501 I 0.000
PROX1 Anolis carolinensis ENSACAG00000006174 I 0.000
AARA009757 Anopheles arabiensis AARA009757 I 0.000
ACUA003826 Anopheles culicifacies ACUA003826 I 0.000
AEPI001687 Anopheles epiroticus AEPI001687 I 0.000
AMIN002618 Anopheles minimus AMIN002618 I 0.000
Afo_R004723 Aptenodytes forsteri Afo_R004723 I 0.000
ENSAMXG00000011717 Astyanax mexicanus ENSAMXG00000011717 I 0.000
ENSAMXG00000012231 Astyanax mexicanus ENSAMXG00000012231 I 0.000
ENSAMXG00000014376 Astyanax mexicanus ENSAMXG00000014376 I 0.000
ENSBTAP00000014573-D1 Bos grunniens ENSBTAP00000014573-D1 I 0.000
ENSP00000405932-D1 Bos grunniens ENSP00000405932-D1 I 0.000
PROX1 Bos taurus ENSBTAG00000010978 I 0.000
PROX2 Bos taurus ENSBTAG00000015052 I 0.000
Brh_R001903 Buceros rhinoceros Brh_R001903 I 0.000
Brh_R009461 Buceros rhinoceros Brh_R009461 I 0.000
PROX1 Callithrix jacchus ENSCJAG00000015514 I 0.000
PROX2 Callithrix jacchus ENSCJAG00000020548 I 0.000
Aan_R011488 Calypte anna Aan_R011488 I 0.000
Cflo_00868--XP_392355.3_APIME Camponotus floridanus Cflo_00868--XP_392355.3_APIME I 0.000
PROX1 Canis familiaris ENSCAFG00000012445 I 0.000
PROX1 Cavia porcellus ENSCPOG00000011987 I 0.000
Cmyd_10014540 Chelonia mydas Cmyd_10014540 I 0.000
ENSCSAG00000015530 Chlorocebus sabaeus ENSCSAG00000015530 I 0.000
CGOC_0000822101 Cylicostephanus goldi CGOC_0000822101 I 0.000
prox2 Danio rerio ENSDARG00000041952 I 0.000
prox1a Danio rerio ENSDARG00000055158 I 0.000
PROX1 Dasypus novemcinctus ENSDNOG00000001297 I 0.000
PROX2 Dasypus novemcinctus ENSDNOG00000005528 I 0.000
YQE_10516 Dendroctonus ponderosae YQE_10516 I 0.000
DICVIV_00921 Dictyocaulus viviparus DICVIV_00921 I 0.000
PROX1 Equus caballus ENSECAG00000019220 I 0.000
ENSECAG00000023529 Equus caballus ENSECAG00000023529 I 0.000
PROX2 Felis catus ENSFCAG00000028658 I 0.000
PROX1 Felis catus ENSFCAG00000029702 I 0.000
ENSFALG00000012357 Ficedula albicollis ENSFALG00000012357 I 0.000
ENSGMOG00000009022 Gadus morhua ENSGMOG00000009022 I 0.000
ENSGMOG00000015166 Gadus morhua ENSGMOG00000015166 I 0.000
PROX1 Gallus gallus ENSGALG00000009791 I 0.000
prox2 Gasterosteus aculeatus ENSGACG00000007538 I 0.000
prox1a Gasterosteus aculeatus ENSGACG00000010140 I 0.000
Gfo_R010932 Geospiza fortis Gfo_R010932 I 0.000
PROX1 Gorilla gorilla ENSGGOG00000015130 I 0.000
HCOI02128500 Haemonchus contortus HCOI02128500 I 0.000
PROX1 Homo sapiens ENSG00000117707 D 0.000
ENSSTOG00000023253 Ictidomys tridecemlineatus ENSSTOG00000023253 I 0.000
ENSLACG00000018909 Latimeria chalumnae ENSLACG00000018909 I 0.000
ENSLOCG00000010701 Lepisosteus oculatus ENSLOCG00000010701 I 0.000
ENSLOCG00000016698 Lepisosteus oculatus ENSLOCG00000016698 I 0.000
PROX1 Loxodonta africana ENSLAFG00000006344 I 0.000
PROX2 Loxodonta africana ENSLAFG00000012545 I 0.000
ENSP00000355925 Macaca fascicularis ENSP00000355925 I 0.000
PROX1 Macaca mulatta ENSMMUG00000011914 I 0.000
ENSMEUG00000002316 Macropus eugenii ENSMEUG00000002316 I 0.000
ENSMEUG00000013465 Macropus eugenii ENSMEUG00000013465 I 0.000
PROX1 Meleagris gallopavo ENSMGAG00000009635 I 0.000
ENSMICG00000006078 Microcebus murinus ENSMICG00000006078 I 0.000
ENSMODG00000006137 Monodelphis domestica ENSMODG00000006137 I 0.000
ENSMPUG00000009289 Mustela putorius furo ENSMPUG00000009289 I 0.000
ENSMPUG00000013456 Mustela putorius furo ENSMPUG00000013456 I 0.000
Prox1 Mus musculus ENSMUSG00000010175 I 0.000
Myotis_brandtii_PROX2_10012935 Myotis brandtii Myotis_brandtii_PROX2_10012935 I 0.000
PROX2 Myotis lucifugus ENSMLUG00000005898 I 0.000
PROX1 Myotis lucifugus ENSMLUG00000006993 I 0.000
NECAME_07738 Necator americanus NECAME_07738 I 0.000
ENSNLEG00000014435 Nomascus leucogenys ENSNLEG00000014435 I 0.000
PROX2 Ochotona princeps ENSOPRG00000011820 I 0.000
nOo.2.0.1.g10265 Onchocerca ochengi nOo.2.0.1.g10265 I 0.000
Ogr08018 Ophisaurus gracilis Ogr08018 N 0.000
Ogr11789 Ophisaurus gracilis Ogr11789 I 0.000
ENSONIG00000012467 Oreochromis niloticus ENSONIG00000012467 I 0.000
ENSONIG00000013518 Oreochromis niloticus ENSONIG00000013518 I 0.000
ENSONIG00000020193 Oreochromis niloticus ENSONIG00000020193 I 0.000
ENSORLG00000001996 Oryzias latipes ENSORLG00000001996 I 0.000
prox1a Oryzias latipes ENSORLG00000014947 I 0.000
prox2 Oryzias latipes ENSORLG00000016587 I 0.000
PROX1 Otolemur garnettii ENSOGAG00000017025 I 0.000
ENSOARG00000001473 Ovis aries ENSOARG00000001473 I 0.000
ENSOARG00000009324 Ovis aries ENSOARG00000009324 I 0.000
PROX1 Pan troglodytes ENSPTRG00000001974 I 0.000
ENSPANG00000017714 Papio anubis ENSPANG00000017714 I 0.000
ENSPSIG00000008098 Pelodiscus sinensis ENSPSIG00000008098 I 0.000
ENSPSIG00000017015 Pelodiscus sinensis ENSPSIG00000017015 I 0.000
ENSPMAG00000006606 Petromyzon marinus ENSPMAG00000006606 I 0.000
ENSPFOG00000003774 Poecilia formosa ENSPFOG00000003774 I 0.000
ENSPFOG00000014635 Poecilia formosa ENSPFOG00000014635 I 0.000
ENSPFOG00000015503 Poecilia formosa ENSPFOG00000015503 I 0.000
Pvit_00353 Pogona vitticeps Pvit_00353 I 0.000
ENSPPYG00000000224 Pongo abelii ENSPPYG00000000224 I 0.000
PROX2 Pteropus vampyrus ENSPVAG00000000659 I 0.000
Prox1 Rattus norvegicus ENSRNOG00000003694 I 0.000
Sakowv30019049m.g Saccoglossus kowalevskii Sakowv30019049m.g N 0.000
ENSSHAG00000018304 Sarcophilus harrisii ENSSHAG00000018304 I 0.000
SBAD_0000068201 Soboliphyme baturini SBAD_0000068201 I 0.000
SINV18378 Solenopsis invicta SINV18378 I 0.000
SVUK_0000405601 Strongylus vulgaris SVUK_0000405601 I 0.000
PROX2 Sus scrofa ENSSSCG00000002373 I 0.000
PROX1 Sus scrofa ENSSSCG00000015584 I 0.000
PROX1 Taeniopygia guttata ENSTGUG00000002974 I 0.000
ENSTRUG00000012738 Takifugu rubripes ENSTRUG00000012738 I 0.000
prox1a Takifugu rubripes ENSTRUG00000013890 I 0.000
prox2 Takifugu rubripes ENSTRUG00000018353 I 0.000
prox1a Tetraodon nigroviridis ENSTNIG00000016378 I 0.000
prox2 Tetraodon nigroviridis ENSTNIG00000017414 I 0.000
D917_07791 Trichinella nativa D917_07791 I 0.000
D918_02805 Trichuris suis D918_02805 I 0.000
PROX2 Tursiops truncatus ENSTTRG00000001912 I 0.000
Tal_R002989 Tyto alba Tal_R002989 I 0.000
prox1.L Xenopus laevis XB-GENE-485331 I 0.000
prox1 Xenopus tropicalis XB-GENE-485327 I 0.000
ENSXMAG00000003709 Xiphophorus maculatus ENSXMAG00000003709 I 0.000
ENSXMAG00000004000 Xiphophorus maculatus ENSXMAG00000004000 I 0.000
ENSXMAG00000014663 Xiphophorus maculatus ENSXMAG00000014663 I 0.000