CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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C_01053
(
Schistosoma haematobium
)
DM
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00751 (DM)
IPR001275
C_01053
T169739_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
DMRT2
M01931_2.00
Homo sapiens
NAATKTATHN
NDATAMATTN
PBM
Weirauch et al.(2014)
pTH9189
0.917
0.809
DMRT2
M10434_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT2_01
0.917
0.809
DMRTA2
M01930_2.00
Homo sapiens
NNHDTDDNNN
NNNHHAHDNN
PBM
Weirauch et al.(2014)
pTH9198
0.913
0.766
dmrta2
M01937_2.00
Xenopus tropicalis
NNWDWDDN
NHHWHWNN
PBM
Weirauch et al.(2014)
pTH9300
0.913
0.766
DMRTA2
M04692_2.00
Homo sapiens
VHTGTWDCVDHN
NDHBGHWACADB
SELEX
Yin et al.(2017)
DMRTA2_eDBD_HT-SELEX
0.913
0.766
DMRTA2
M10433_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT5_01
0.913
0.766
DMRTA2
M04693_2.00
Homo sapiens
HHTGTWDCVNHN
NDNBGHWACADD
SELEX
Yin et al.(2017)
DMRTA2_eDBD_Methyl-HT-SELEX
0.913
0.766
dmrt99B
M01935_2.00
Drosophila melanogaster
WRTWDCNDNN
NNHNGHWAYW
PBM
Weirauch et al.(2014)
pTH9261
0.913
0.745
dmrt99B
M01211_2.00
Drosophila melanogaster
NNHDTDDNNN
NNNHHAHDNN
PBM
Lambert et al.(2019)
pTH9799
0.913
0.745
dmrt99B
M03720_2.00
Drosophila melanogaster
HNGHWACAATGTWDCND
HNGHWACATTGTWDCND
SELEX
Nitta et al.(2015)
dmrt99B_1
0.913
0.745
DMRT3
M01927_2.00
Homo sapiens
NWTGTAWCMNN
NNKGWTACAWN
PBM
Weirauch et al.(2014)
pTH9188
0.899
0.723
DMRT3
M04681_2.00
Homo sapiens
AWTGTAWCAAWWH
DWWTTGWTACAWT
SELEX
Yin et al.(2017)
DMRT3_eDBD_HT-SELEX
0.899
0.723
DMRT3
M10430_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT3_01
0.899
0.723
DMRT3
M04682_2.00
Homo sapiens
AATGTAWCRAWWY
RWWTYGWTACATT
SELEX
Yin et al.(2017)
DMRT3_eDBD_Methyl-HT-SELEX
0.899
0.723
dmd-4
M00656_2.00
Caenorhabditis elegans
NWGTAWCNNN
NNNGWTACWN
PBM
Narasimhan et al.(2015)
pTH10640
0.894
0.702
dmd-5
M00659_2.00
Caenorhabditis elegans
WNWRTWDHNN
NNDHWAYWNW
PBM
Narasimhan et al.(2015)
pTH10777
0.891
0.723
Dmrt1
M09027_2.00
Mus musculus
HDGHWACAAWGTWDCHN
NDGHWACWTTGTWDCHD
Misc
Kulakovskiy et al.(2013)
DMRT1_MOUSE.H11MO.0.C
0.865
0.681
DMRT1
M01928_2.00
Homo sapiens
NDWGTWDCNN
NNGHWACWHN
PBM
Weirauch et al.(2014)
pTH9197
0.862
0.681
DMRT1
M01929_2.00
Homo sapiens
TGTATCAA
TTGATACA
PBM
Weirauch et al.(2014)
pTH9446
0.862
0.681
DMRT1
M04683_2.00
Homo sapiens
NWTGTWDCVWHN
NDWBGHWACAWN
SELEX
Yin et al.(2017)
DMRT1_FL_HT-SELEX
0.862
0.681
DMRT1
M10431_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DMRT1_01
0.862
0.681
DMRT1
M04684_2.00
Homo sapiens
NDYGTWDCVNNN
NNNBGHWACRHN
SELEX
Yin et al.(2017)
DMRT1_FL_Methyl-HT-SELEX
0.862
0.681
Dmrtb1
M09028_2.00
Mus musculus
DGHWACAMWGTWDCHV
BDGHWACWKTGTWDCH
Misc
Kulakovskiy et al.(2013)
DMRTB_MOUSE.H11MO.0.C
0.861
0.596
dmrt93B
M03718_2.00
Drosophila melanogaster
NDTGTATCRWW
WWYGATACAHN
SELEX
Nitta et al.(2015)
dmrt93B_1
0.855
0.702
dmrt93B
M03719_2.00
Drosophila melanogaster
NNHGTAWCNNN
NNNGWTACDNN
SELEX
Nitta et al.(2015)
dmrt93B_2
0.855
0.702
For this family, TFs with SR scores >
0.845
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
C_01053
DM
25
71
RVPKCTRCRNHGVISSLKGHKRHCRWKNCHCAACLLVVERQRVMAAQ
Links
Other
DM
family TFs
Other
Schistosoma haematobium
TFs
532 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
nAv.1.0.1.g01517
Acanthocheilonema viteae
nAv.1.0.1.g01517
I
ANCCAN_03696
Ancylostoma caninum
ANCCAN_03696
I
ACAC_0001014401
Angiostrongylus cantonensis
ACAC_0001014401
N
ACOC_0000988901
Angiostrongylus costaricensis
ACOC_0000988901
N
ASIM_0001558001
Anisakis simplex
ASIM_0001558001
I
ASU_04180
Ascaris suum
ASU_04180
I
Bm2663
Brugia malayi
Bm2663
I
BTMF_0001276401
Brugia timori
BTMF_0001276401
I
CBN10543
Caenorhabditis brenneri
CBN10543
I
CBG17980
Caenorhabditis briggsae
CBG17980
I
pal-1
Caenorhabditis elegans
WBGene00003912
D
CJA02391
Caenorhabditis japonica
CJA02391
I
CRE20227
Caenorhabditis remanei
CRE20227
I
DICVIV_02748
Dictyocaulus viviparus
DICVIV_02748
N
nDi.2.2.2.g06197
Dirofilaria immitis
nDi.2.2.2.g06197
I
EEL_0000223001
Elaeophora elaphi
EEL_0000223001
I
EVEC_0000579401
Enterobius vermicularis
EVEC_0000579401
I
HCOI01745700
Haemonchus contortus
HCOI01745700
I
HPLM_0000060301
Haemonchus placei
HPLM_0000060301
I
HPBE_0001563701
Heligmosomoides bakeri
HPBE_0001563701
I
HelroG148593
Helobdella robusta
HelroG148593
I
HelroG148587
Helobdella robusta
HelroG148587
I
HelroG148126
Helobdella robusta
HelroG148126
N
nLs.2.1.2.g09719
Litomosoides sigmodontis
nLs.2.1.2.g09719
I
LOAG_15485
Loa loa
LOAG_15485
I
ENSMODG00000025439
Monodelphis domestica
ENSMODG00000025439
I
NECAME_06333
Necator americanus
NECAME_06333
I
NBR_0000825001
Nippostrongylus brasiliensis
NBR_0000825001
I
OESDEN_25610
Oesophagostomum dentatum
OESDEN_25610
N
OESDEN_19696
Oesophagostomum dentatum
OESDEN_19696
I
OFLC_0000632501
Onchocerca flexuosa
OFLC_0000632501
I
WBGene00246390
Onchocerca volvulus
WBGene00246390
I
PEQ_0000241601
Parascaris equorum
PEQ_0000241601
N
PTRK_0001336600
Parastrongyloides trichosuri
PTRK_0001336600
I
Ppa-pal-1
Pristionchus pacificus
PPA02358
I
RSKR_0001046900
Rhabditophanes kr3021
RSKR_0001046900
I
SPAL_0001492700
Strongyloides papillosus
SPAL_0001492700
I
SSTP_0000576200
Strongyloides stercoralis
SSTP_0000576200
I
SVE_0397300
Strongyloides venezuelensis
SVE_0397300
I
SVUK_0001504901
Strongylus vulgaris
SVUK_0001504901
I
SMUV_0000918401
Syphacia muris
SMUV_0000918401
I
TCLT_0000255601
Thelazia callipaeda
TCLT_0000255601
I
TCNE_0000481301
Toxocara canis
TCNE_0000481301
N
TCNE_0001280701
Toxocara canis
TCNE_0001280701
I
EFV58119
Trichinella spiralis
EFV58119
I
WUBG_02562
Wuchereria bancrofti
WUBG_02562
I